Literature DB >> 17715304

Rhythms and alternating patterns in plants as emergent properties of a model of interaction between development and functioning.

Amélie Mathieu1, Paul-Henry Cournède, Daniel Barthélémy, Philippe de Reffye.   

Abstract

BACKGROUND AND AIMS: To model plasticity of plants in their environment, a new version of the functional-structural model GREENLAB has been developed with full interactions between architecture and functioning. Emergent properties of this model were revealed by simulations, in particular the automatic generation of rhythms in plant development. Such behaviour can be observed in natural phenomena such as the appearance of fruit (cucumber or capsicum plants, for example) or branch formation in trees.
METHODS: In the model, a single variable, the source-sink ratio controls different events in plant architecture. In particular, the number of fruits and branch formation are determined as increasing functions of this ratio. For some sets of well-chosen parameters of the model, the dynamical evolution of the ratio during plant growth generates rhythms. KEY RESULTS AND
CONCLUSIONS: Cyclic patterns in branch formation or fruit appearance emerge without being forced by the model. The model is based on the theory of discrete dynamical systems. The mathematical formalism helps us to explain rhythm generation and to control the behaviour of the system. Rhythms can appear during both the exponential and stabilized phases of growth, but the causes are different as shown by an analytical study of the system. Simulated plant behaviours are very close to those observed on real plants. With a small number of parameters, the model gives very interesting results from a qualitative point of view. It will soon be subjected to experimental data to estimate the model parameters.

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Year:  2007        PMID: 17715304      PMCID: PMC2710268          DOI: 10.1093/aob/mcm171

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  5 in total

1.  Flower and fruit abortion in sweet pepper in relation to source and sink strength.

Authors:  L F M Marcelis; E Heuvelink; L R Baan Hofman-Eijer; J Den Bakker; L B Xue
Journal:  J Exp Bot       Date:  2004-08-27       Impact factor: 6.992

2.  A dynamic, architectural plant model simulating resource-dependent growth.

Authors:  Hong-Ping Yan; Meng Zhen Kang; Philippe de Reffye; Michael Dingkuhn
Journal:  Ann Bot       Date:  2004-03-31       Impact factor: 4.357

3.  Parameter optimization and field validation of the functional-structural model GREENLAB for maize.

Authors:  Yan Guo; Yuntao Ma; Zhigang Zhan; Baoguo Li; Michael Dingkuhn; Delphine Luquet; Philippe De Reffye
Journal:  Ann Bot       Date:  2006-01-03       Impact factor: 4.357

Review 4.  Plant architecture: a dynamic, multilevel and comprehensive approach to plant form, structure and ontogeny.

Authors:  Daniel Barthélémy; Yves Caraglio
Journal:  Ann Bot       Date:  2007-01-11       Impact factor: 4.357

5.  A simulation model for dry matter partitioning in cucumber.

Authors:  L F Marcelis
Journal:  Ann Bot       Date:  1994-07       Impact factor: 4.357

  5 in total
  9 in total

1.  Simulation of fruit-set and trophic competition and optimization of yield advantages in six Capsicum cultivars using functional-structural plant modelling.

Authors:  Y T Ma; A M Wubs; A Mathieu; E Heuvelink; J Y Zhu; B G Hu; P H Cournède; P de Reffye
Journal:  Ann Bot       Date:  2010-11-22       Impact factor: 4.357

2.  A dynamic model of plant growth with interactions between development and functional mechanisms to study plant structural plasticity related to trophic competition.

Authors:  A Mathieu; P H Cournède; V Letort; D Barthélémy; P de Reffye
Journal:  Ann Bot       Date:  2009-03-18       Impact factor: 4.357

3.  Genetic differences in fruit-set patterns are determined by differences in fruit sink strength and a source : sink threshold for fruit set.

Authors:  A M Wubs; Y Ma; E Heuvelink; L F M Marcelis
Journal:  Ann Bot       Date:  2009-07-30       Impact factor: 4.357

4.  Plant growth modelling and applications: the increasing importance of plant architecture in growth models.

Authors:  Thierry Fourcaud; Xiaopeng Zhang; Alexia Stokes; Hans Lambers; Christian Körner
Journal:  Ann Bot       Date:  2008-04-03       Impact factor: 4.357

5.  Stochastic modelling of tree architecture and biomass allocation: application to teak (Tectona grandis L. f.), a tree species with polycyclic growth and leaf neoformation.

Authors:  Kodjo Tondjo; Loïc Brancheriau; Sylvie Sabatier; Adzo Dzifa Kokutse; Kouami Kokou; Marc Jaeger; Philippe de Reffye; Thierry Fourcaud
Journal:  Ann Bot       Date:  2018-06-08       Impact factor: 4.357

6.  Characterization of the interactions between architecture and source-sink relationships in winter oilseed rape (Brassica napus) using the GreenLab model.

Authors:  Alexandra Jullien; Amélie Mathieu; Jean-Michel Allirand; Amélie Pinet; Philippe de Reffye; Paul-Henry Cournède; Bertrand Ney
Journal:  Ann Bot       Date:  2010-10-27       Impact factor: 4.357

7.  Dry matter partitioning models for the simulation of individual fruit growth in greenhouse cucumber canopies.

Authors:  Dirk Wiechers; Katrin Kahlen; Hartmut Stützel
Journal:  Ann Bot       Date:  2011-06-28       Impact factor: 4.357

8.  A functional-structural kiwifruit vine model integrating architecture, carbon dynamics and effects of the environment.

Authors:  Mikolaj Cieslak; Alla N Seleznyova; Jim Hanan
Journal:  Ann Bot       Date:  2010-09-20       Impact factor: 4.357

9.  Coffee tree architecture and its interactions with microclimates drive the dynamics of coffee berry disease in coffee trees.

Authors:  Natacha Motisi; Fabienne Ribeyre; Sylvain Poggi
Journal:  Sci Rep       Date:  2019-02-22       Impact factor: 4.379

  9 in total

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