Literature DB >> 17710636

Membrane protein structural biology--how far can the bugs take us?

Erik Granseth1, Susanna Seppälä, Mikaela Rapp, Daniel O Daley, Gunnar Von Heijne.   

Abstract

Membrane proteins are core components of many essential cellular processes, and high-resolution structural data is therefore highly sought after. However, owing to the many bottlenecks associated with membrane protein crystallization, progress has been slow. One major problem is our inability to obtain sufficient quantities of membrane proteins for crystallization trials. Traditionally, membrane proteins have been isolated from natural sources, or for prokaryotic proteins, expressed by recombinant techniques. We are however a long way away from a streamlined overproduction of eukaryotic proteins. With this technical limitation in mind, we have probed the question as to how far prokaryotic homologues can take us towards a structural understanding of the eukaryotic/human membrane proteome(s).

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Year:  2007        PMID: 17710636     DOI: 10.1080/09687680701413882

Source DB:  PubMed          Journal:  Mol Membr Biol        ISSN: 0968-7688            Impact factor:   2.857


  16 in total

1.  GFT projection NMR based resonance assignment of membrane proteins: application to subunit C of E. coli F(1)F (0) ATP synthase in LPPG micelles.

Authors:  Qi Zhang; Hanudatta S Atreya; Douglas E Kamen; Mark E Girvin; Thomas Szyperski
Journal:  J Biomol NMR       Date:  2008-02-14       Impact factor: 2.835

2.  Monitoring membrane protein conformational heterogeneity by fluorescence lifetime distribution analysis using the maximum entropy method.

Authors:  Sourav Haldar; Mamata Kombrabail; G Krishnamoorthy; Amitabha Chattopadhyay
Journal:  J Fluoresc       Date:  2009-10-09       Impact factor: 2.217

3.  Diversity-Oriented Synthesis as a Strategy for Fragment Evolution against GSK3β.

Authors:  Yikai Wang; Jean-Yves Wach; Patrick Sheehan; Cheng Zhong; Chenyang Zhan; Richard Harris; Steven C Almo; Joshua Bishop; Stephen J Haggarty; Alexander Ramek; Kayla N Berry; Conor O'Herin; Angela N Koehler; Alvin W Hung; Damian W Young
Journal:  ACS Med Chem Lett       Date:  2016-07-14       Impact factor: 4.345

Review 4.  Membrane protein insertion at the endoplasmic reticulum.

Authors:  Sichen Shao; Ramanujan S Hegde
Journal:  Annu Rev Cell Dev Biol       Date:  2011-07-21       Impact factor: 13.827

5.  All-atom and coarse-grained molecular dynamics simulations of a membrane protein stabilizing polymer.

Authors:  Jason D Perlmutter; William J Drasler; Wangshen Xie; Jiali Gao; Jean-Luc Popot; Jonathan N Sachs
Journal:  Langmuir       Date:  2011-08-15       Impact factor: 3.882

6.  Membrane organization and dynamics of "inner pair" and "outer pair" tryptophan residues in gramicidin channels.

Authors:  Sourav Haldar; Arunima Chaudhuri; Hong Gu; Roger E Koeppe; Mamata Kombrabail; G Krishnamoorthy; Amitabha Chattopadhyay
Journal:  J Phys Chem B       Date:  2012-08-30       Impact factor: 2.991

7.  Coordinating the impact of structural genomics on the human α-helical transmembrane proteome.

Authors:  Ursula Pieper; Avner Schlessinger; Edda Kloppmann; Geoffrey A Chang; James J Chou; Mark E Dumont; Brian G Fox; Petra Fromme; Wayne A Hendrickson; Michael G Malkowski; Douglas C Rees; David L Stokes; Michael H B Stowell; Michael C Wiener; Burkhard Rost; Robert M Stroud; Raymond C Stevens; Andrej Sali
Journal:  Nat Struct Mol Biol       Date:  2013-02       Impact factor: 15.369

8.  Transmembrane protein topology prediction using support vector machines.

Authors:  Timothy Nugent; David T Jones
Journal:  BMC Bioinformatics       Date:  2009-05-26       Impact factor: 3.169

9.  Transmembrane topology of the mammalian Slc11a2 iron transporter.

Authors:  Maciej Czachorowski; Steven Lam-Yuk-Tseung; Mathieu Cellier; Philippe Gros
Journal:  Biochemistry       Date:  2009-09-08       Impact factor: 3.162

Review 10.  Tuning microbial hosts for membrane protein production.

Authors:  Maria Freigassner; Harald Pichler; Anton Glieder
Journal:  Microb Cell Fact       Date:  2009-12-29       Impact factor: 5.328

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