Literature DB >> 17698331

Temporal abstraction for feature extraction: a comparative case study in prediction from intensive care monitoring data.

Marion Verduijn1, Lucia Sacchi, Niels Peek, Riccardo Bellazzi, Evert de Jonge, Bas A J M de Mol.   

Abstract

OBJECTIVES: To compare two temporal abstraction procedures for the extraction of meta features from monitoring data. Feature extraction prior to predictive modeling is a common strategy in prediction from temporal data. A fundamental dilemma in this strategy, however, is the extent to which the extraction should be guided by domain knowledge, and to which extent it should be guided by the available data. The two temporal abstraction procedures compared in this case study differ in this respect. METHODS AND MATERIAL: The first temporal abstraction procedure derives symbolic descriptions from the data that are predefined using existing concepts from the medical language. In the second procedure, a large space of numerical meta features is searched through to discover relevant features from the data. These procedures were applied to a prediction problem from intensive care monitoring data. The predictive value of the resulting meta features were compared, and based on each type of features, a class probability tree model was developed.
RESULTS: The numerical meta features extracted by the second procedure were found to be more informative than the symbolic meta features of the first procedure in the case study, and a superior predictive performance was observed for the associated tree model.
CONCLUSION: The findings indicate that for prediction from monitoring data, induction of numerical meta features from data is preferable to extraction of symbolic meta features using existing clinical concepts.

Mesh:

Year:  2007        PMID: 17698331     DOI: 10.1016/j.artmed.2007.06.003

Source DB:  PubMed          Journal:  Artif Intell Med        ISSN: 0933-3657            Impact factor:   5.326


  4 in total

1.  Prediction of clinical conditions after coronary bypass surgery using dynamic data analysis.

Authors:  K Van Loon; F Guiza; G Meyfroidt; J-M Aerts; J Ramon; H Blockeel; M Bruynooghe; G Van den Berghe; D Berckmans
Journal:  J Med Syst       Date:  2010-06       Impact factor: 4.460

2.  Medical temporal-knowledge discovery via temporal abstraction.

Authors:  Robert Moskovitch; Yuval Shahar
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

3.  Incorporating High-Frequency Physiologic Data Using Computational Dictionary Learning Improves Prediction of Delayed Cerebral Ischemia Compared to Existing Methods.

Authors:  Murad Megjhani; Kalijah Terilli; Hans-Peter Frey; Angela G Velazquez; Kevin William Doyle; Edward Sander Connolly; David Jinou Roh; Sachin Agarwal; Jan Claassen; Noemie Elhadad; Soojin Park
Journal:  Front Neurol       Date:  2018-03-07       Impact factor: 4.003

4.  Feature engineering with clinical expert knowledge: A case study assessment of machine learning model complexity and performance.

Authors:  Kenneth D Roe; Vibhu Jawa; Xiaohan Zhang; Christopher G Chute; Jeremy A Epstein; Jordan Matelsky; Ilya Shpitser; Casey Overby Taylor
Journal:  PLoS One       Date:  2020-04-23       Impact factor: 3.240

  4 in total

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