Literature DB >> 17693088

Code and context: Prochlorococcus as a model for cross-scale biology.

Maureen L Coleman1, Sallie W Chisholm.   

Abstract

Prochlorococcus is a simple cyanobacterium that is abundant throughout large regions of the oceans, and has become a useful model for studying the nature and regulation of biological diversity across all scales of complexity. Recent work has revealed that environmental factors such as light, nutrients and predation influence diversity in different ways, changing our image of the structure and dynamics of the global Prochlorococcus population. Advances in metagenomics, transcription profiling and global ecosystem modeling promise to deliver an even greater understanding of this system and further demonstrate the power of cross-scale systems biology.

Mesh:

Substances:

Year:  2007        PMID: 17693088     DOI: 10.1016/j.tim.2007.07.001

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  53 in total

1.  Novel lineages of Prochlorococcus and Synechococcus in the global oceans.

Authors:  Sijun Huang; Steven W Wilhelm; H Rodger Harvey; Karen Taylor; Nianzhi Jiao; Feng Chen
Journal:  ISME J       Date:  2011-09-29       Impact factor: 10.302

2.  Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean.

Authors:  Yanmei Shi; Gene W Tyson; John M Eppley; Edward F DeLong
Journal:  ISME J       Date:  2010-12-09       Impact factor: 10.302

3.  Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.

Authors:  Alyse A Larkin; Sara K Blinebry; Caroline Howes; Yajuan Lin; Sarah E Loftus; Carrie A Schmaus; Erik R Zinser; Zackary I Johnson
Journal:  ISME J       Date:  2016-01-22       Impact factor: 10.302

4.  Global biogeography of Prochlorococcus genome diversity in the surface ocean.

Authors:  Alyssa G Kent; Chris L Dupont; Shibu Yooseph; Adam C Martiny
Journal:  ISME J       Date:  2016-02-02       Impact factor: 10.302

5.  Microbial community gene expression in ocean surface waters.

Authors:  Jorge Frias-Lopez; Yanmei Shi; Gene W Tyson; Maureen L Coleman; Stephan C Schuster; Sallie W Chisholm; Edward F Delong
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-03       Impact factor: 11.205

Review 6.  Ecological genomics of marine picocyanobacteria.

Authors:  D J Scanlan; M Ostrowski; S Mazard; A Dufresne; L Garczarek; W R Hess; A F Post; M Hagemann; I Paulsen; F Partensky
Journal:  Microbiol Mol Biol Rev       Date:  2009-06       Impact factor: 11.056

7.  Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus.

Authors:  Pedro Flombaum; José L Gallegos; Rodolfo A Gordillo; José Rincón; Lina L Zabala; Nianzhi Jiao; David M Karl; William K W Li; Michael W Lomas; Daniele Veneziano; Carolina S Vera; Jasper A Vrugt; Adam C Martiny
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-23       Impact factor: 11.205

8.  Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean.

Authors:  Brandon K Swan; Ben Tupper; Alexander Sczyrba; Federico M Lauro; Manuel Martinez-Garcia; José M González; Haiwei Luo; Jody J Wright; Zachary C Landry; Niels W Hanson; Brian P Thompson; Nicole J Poulton; Patrick Schwientek; Silvia G Acinas; Stephen J Giovannoni; Mary Ann Moran; Steven J Hallam; Ricardo Cavicchioli; Tanja Woyke; Ramunas Stepanauskas
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-25       Impact factor: 11.205

Review 9.  Explaining microbial population genomics through phage predation.

Authors:  Francisco Rodriguez-Valera; Ana-Belen Martin-Cuadrado; Beltran Rodriguez-Brito; Lejla Pasić; T Frede Thingstad; Forest Rohwer; Alex Mira
Journal:  Nat Rev Microbiol       Date:  2009-11       Impact factor: 60.633

10.  Chemistry of personalized solar energy.

Authors:  Daniel G Nocera
Journal:  Inorg Chem       Date:  2009-11-02       Impact factor: 5.165

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.