Literature DB >> 19487728

Ecological genomics of marine picocyanobacteria.

D J Scanlan1, M Ostrowski, S Mazard, A Dufresne, L Garczarek, W R Hess, A F Post, M Hagemann, I Paulsen, F Partensky.   

Abstract

Marine picocyanobacteria of the genera Prochlorococcus and Synechococcus numerically dominate the picophytoplankton of the world ocean, making a key contribution to global primary production. Prochlorococcus was isolated around 20 years ago and is probably the most abundant photosynthetic organism on Earth. The genus comprises specific ecotypes which are phylogenetically distinct and differ markedly in their photophysiology, allowing growth over a broad range of light and nutrient conditions within the 45 degrees N to 40 degrees S latitudinal belt that they occupy. Synechococcus and Prochlorococcus are closely related, together forming a discrete picophytoplankton clade, but are distinguishable by their possession of dissimilar light-harvesting apparatuses and differences in cell size and elemental composition. Synechococcus strains have a ubiquitous oceanic distribution compared to that of Prochlorococcus strains and are characterized by phylogenetically discrete lineages with a wide range of pigmentation. In this review, we put our current knowledge of marine picocyanobacterial genomics into an environmental context and present previously unpublished genomic information arising from extensive genomic comparisons in order to provide insights into the adaptations of these marine microbes to their environment and how they are reflected at the genomic level.

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Year:  2009        PMID: 19487728      PMCID: PMC2698417          DOI: 10.1128/MMBR.00035-08

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  258 in total

1.  Protonmotive force, ExbB and ligand-bound FepA drive conformational changes in TonB.

Authors:  R A Larsen; M G Thomas; K Postle
Journal:  Mol Microbiol       Date:  1999-03       Impact factor: 3.501

Review 2.  Prochlorococcus, a marine photosynthetic prokaryote of global significance.

Authors:  F Partensky; W R Hess; D Vaulot
Journal:  Microbiol Mol Biol Rev       Date:  1999-03       Impact factor: 11.056

3.  Niche-partitioning of Prochlorococcus populations in a stratified water column in the eastern North Atlantic Ocean.

Authors:  N J West; D J Scanlan
Journal:  Appl Environ Microbiol       Date:  1999-06       Impact factor: 4.792

4.  Microbial water stress.

Authors:  A D Brown
Journal:  Bacteriol Rev       Date:  1976-12

5.  Expression of the ggpS gene, involved in osmolyte synthesis in the marine cyanobacterium Synechococcus sp. Strain PCC 7002, revealed regulatory differences between this strain and the freshwater strain Synechocystis sp. Strain PCC 6803.

Authors:  F Engelbrecht; K Marin; M Hagemann
Journal:  Appl Environ Microbiol       Date:  1999-11       Impact factor: 4.792

6.  Thioredoxin peroxidase in the Cyanobacterium Synechocystis sp. PCC 6803.

Authors:  H Yamamoto; C Miyake; K J Dietz; K Tomizawa; N Murata; A Yokota
Journal:  FEBS Lett       Date:  1999-03-26       Impact factor: 4.124

7.  A novel nitrate/nitrite permease in the marine Cyanobacterium synechococcus sp. strain PCC 7002.

Authors:  T Sakamoto; K Inoue-Sakamoto; D A Bryant
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

8.  Phycoerythrins of the oxyphotobacterium Prochlorococcus marinus are associated to the thylakoid membrane and are encoded by a single large gene cluster.

Authors:  W R Hess; C Steglich; C Lichtlé; F Partensky
Journal:  Plant Mol Biol       Date:  1999-06       Impact factor: 4.076

9.  Light-harvesting antenna function of phycoerythrin in prochlorococcus marinus

Authors: 
Journal:  Biochim Biophys Acta       Date:  1999-01-27

10.  The marine cyanobacterium Synechococcus sp. WH7805 requires urease (urea amidohydrolase, EC 3.5.1.5) to utilize urea as a nitrogen source: molecular-genetic and biochemical analysis of the enzyme.

Authors:  Jackie L Collier; Bianca Brahamsha; Brian Palenik
Journal:  Microbiology       Date:  1999-02       Impact factor: 2.777

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  239 in total

1.  Low-diversity bacterial community in the gut of the fruitfly Drosophila melanogaster.

Authors:  Chun Nin Adam Wong; Patrick Ng; Angela E Douglas
Journal:  Environ Microbiol       Date:  2011-06-01       Impact factor: 5.491

2.  Investment in rapid growth shapes the evolutionary rates of essential proteins.

Authors:  Sara Vieira-Silva; Marie Touchon; Sophie S Abby; Eduardo P C Rocha
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-30       Impact factor: 11.205

Review 3.  Acclimation to high-light conditions in cyanobacteria: from gene expression to physiological responses.

Authors:  Masayuki Muramatsu; Yukako Hihara
Journal:  J Plant Res       Date:  2011-10-18       Impact factor: 2.629

4.  Novel lineages of Prochlorococcus and Synechococcus in the global oceans.

Authors:  Sijun Huang; Steven W Wilhelm; H Rodger Harvey; Karen Taylor; Nianzhi Jiao; Feng Chen
Journal:  ISME J       Date:  2011-09-29       Impact factor: 10.302

5.  From complete genome sequence to 'complete' understanding?

Authors:  Michael Y Galperin; Eugene V Koonin
Journal:  Trends Biotechnol       Date:  2010-08       Impact factor: 19.536

6.  Functional characterization of Synechocystis sp. strain PCC 6803 pst1 and pst2 gene clusters reveals a novel strategy for phosphate uptake in a freshwater cyanobacterium.

Authors:  Frances D Pitt; Sophie Mazard; Lee Humphreys; David J Scanlan
Journal:  J Bacteriol       Date:  2010-04-30       Impact factor: 3.490

7.  Genomic and functional adaptation in surface ocean planktonic prokaryotes.

Authors:  Shibu Yooseph; Kenneth H Nealson; Douglas B Rusch; John P McCrow; Christopher L Dupont; Maria Kim; Justin Johnson; Robert Montgomery; Steve Ferriera; Karen Beeson; Shannon J Williamson; Andrey Tovchigrechko; Andrew E Allen; Lisa A Zeigler; Granger Sutton; Eric Eisenstadt; Yu-Hui Rogers; Robert Friedman; Marvin Frazier; J Craig Venter
Journal:  Nature       Date:  2010-11-04       Impact factor: 49.962

8.  Characterization of a nitric oxide synthase from the plant kingdom: NO generation from the green alga Ostreococcus tauri is light irradiance and growth phase dependent.

Authors:  Noelia Foresi; Natalia Correa-Aragunde; Gustavo Parisi; Gonzalo Caló; Graciela Salerno; Lorenzo Lamattina
Journal:  Plant Cell       Date:  2010-11-30       Impact factor: 11.277

9.  Effects of Asian dust storms on synechococcus populations in the subtropical Kuroshio Current.

Authors:  Chih-Ching Chung; Jeng Chang; Gwo-Ching Gong; Shih-Chieh Hsu; Kuo-Ping Chiang; Chia-Wen Liao
Journal:  Mar Biotechnol (NY)       Date:  2010-12-14       Impact factor: 3.619

10.  Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.

Authors:  Alyse A Larkin; Sara K Blinebry; Caroline Howes; Yajuan Lin; Sarah E Loftus; Carrie A Schmaus; Erik R Zinser; Zackary I Johnson
Journal:  ISME J       Date:  2016-01-22       Impact factor: 10.302

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