Literature DB >> 17687667

Too many mutants with multiple mutations.

John W Drake1.   

Abstract

It has recently become clear that the classical notion of the random nature of mutation does not hold for the distribution of mutations among genes: most collections of mutants contain more isolates with two or more mutations than predicted by the mutant frequency on the assumption of a random distribution of mutations. Excesses of multiples are seen in a wide range of organisms, including riboviruses, DNA viruses, prokaryotes, yeasts, and higher eukaryotic cell lines and tissues. In addition, such excesses are produced by DNA polymerases in vitro. These "multiples" appear to be generated by transient, localized hypermutation rather than by heritable mutator mutations. The components of multiples are sometimes scattered at random and sometimes display an excess of smaller distances between mutations. As yet, almost nothing is known about the mechanisms that generate multiples, but such mutations have the capacity to accelerate those evolutionary pathways that require multiple mutations where the individual mutations are neutral or deleterious. Examples that impinge on human health may include carcinogenesis and the adaptation of microbial pathogens as they move between individual hosts.

Entities:  

Mesh:

Year:  2007        PMID: 17687667      PMCID: PMC2265383          DOI: 10.1080/10409230701495631

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  61 in total

1.  Mutation spectra of herpes simplex virus type 1 thymidine kinase mutants.

Authors:  Qiaosheng Lu; Ying T Hwang; Charles B C Hwang
Journal:  J Virol       Date:  2002-06       Impact factor: 5.103

2.  Exonuclease-deficient polymerase mutant of herpes simplex virus type 1 induces altered spectra of mutations.

Authors:  Ying T Hwang; Charles B C Hwang
Journal:  J Virol       Date:  2003-03       Impact factor: 5.103

3.  The rate and character of spontaneous mutation in an RNA virus.

Authors:  José M Malpica; Aurora Fraile; Ignacio Moreno; Clara I Obies; John W Drake; Fernando García-Arenal
Journal:  Genetics       Date:  2002-12       Impact factor: 4.562

4.  Adaptive mutation in Escherichia coli.

Authors:  Patricia L Foster
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

5.  Measurement of SOS expression in individual Escherichia coli K-12 cells using fluorescence microscopy.

Authors:  Jesse D McCool; Edward Long; Joseph F Petrosino; Hilary A Sandler; Susan M Rosenberg; Steven J Sandler
Journal:  Mol Microbiol       Date:  2004-09       Impact factor: 3.501

6.  Evidence for mutation showers.

Authors:  Jicheng Wang; Kelly D Gonzalez; William A Scaringe; Kimberly Tsai; Ning Liu; Dongqing Gu; Wenyan Li; Kathleen A Hill; Steve S Sommer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-07       Impact factor: 11.205

7.  The unexpected landscape of in vivo somatic mutation in a human epithelial cell lineage.

Authors:  Lorel M Colgin; Alden F M Hackmann; Mary J Emond; Raymond J Monnat
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

8.  Threonine 79 is a hinge residue that governs the fidelity of DNA polymerase beta by helping to position the DNA within the active site.

Authors:  Mausumi Maitra; Andrew Gudzelak; Shu-Xia Li; Yoshihiro Matsumoto; Kristin A Eckert; Joachim Jager; Joann B Sweasy
Journal:  J Biol Chem       Date:  2002-07-16       Impact factor: 5.157

9.  Spontaneous multiple mutations show both proximal spacing consistent with chronocoordinate events and alterations with p53-deficiency.

Authors:  Kathleen A Hill; Jicheng Wang; Kelly D Farwell; William A Scaringe; Steve S Sommer
Journal:  Mutat Res       Date:  2004-10-04       Impact factor: 2.433

Review 10.  Multiple mutations and cancer.

Authors:  Lawrence A Loeb; Keith R Loeb; Jon P Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

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  46 in total

1.  Pervasive multinucleotide mutational events in eukaryotes.

Authors:  Daniel R Schrider; Jonathan N Hourmozdi; Matthew W Hahn
Journal:  Curr Biol       Date:  2011-06-21       Impact factor: 10.834

2.  Mutation biases and mutation rate variation around very short human microsatellites revealed by human-chimpanzee-orangutan genomic sequence alignments.

Authors:  William Amos
Journal:  J Mol Evol       Date:  2010-08-11       Impact factor: 2.395

3.  The rate of establishment of complex adaptations.

Authors:  Michael Lynch; Adam Abegg
Journal:  Mol Biol Evol       Date:  2010-01-29       Impact factor: 16.240

4.  Localized hypermutation and associated gene losses in legume chloroplast genomes.

Authors:  Alan M Magee; Sue Aspinall; Danny W Rice; Brian P Cusack; Marie Sémon; Antoinette S Perry; Sasa Stefanović; Dan Milbourne; Susanne Barth; Jeffrey D Palmer; John C Gray; Tony A Kavanagh; Kenneth H Wolfe
Journal:  Genome Res       Date:  2010-10-26       Impact factor: 9.043

5.  Widespread Historical Contingency in Influenza Viruses.

Authors:  Jean Claude Nshogozabahizi; Jonathan Dench; Stéphane Aris-Brosou
Journal:  Genetics       Date:  2016-11-09       Impact factor: 4.562

Review 6.  Selection and mutation in the "new" genetics: an emerging hypothesis.

Authors:  Bruce Gottlieb; Lenore K Beitel; Carlos Alvarado; Mark A Trifiro
Journal:  Hum Genet       Date:  2010-01-23       Impact factor: 4.132

7.  The relationship between mutation frequency and replication strategy in positive-sense single-stranded RNA viruses.

Authors:  Gaël Thébaud; Joël Chadoeuf; Marco J Morelli; John W McCauley; Daniel T Haydon
Journal:  Proc Biol Sci       Date:  2009-11-11       Impact factor: 5.349

8.  Is evolution Darwinian or/and Lamarckian?

Authors:  Eugene V Koonin; Yuri I Wolf
Journal:  Biol Direct       Date:  2009-11-11       Impact factor: 4.540

9.  Role of mutation in Pseudomonas aeruginosa biofilm development.

Authors:  Tim C R Conibear; Samuel L Collins; Jeremy S Webb
Journal:  PLoS One       Date:  2009-07-16       Impact factor: 3.240

10.  Derivation of Escherichia coli O157:H7 from its O55:H7 precursor.

Authors:  Zhemin Zhou; Xiaomin Li; Bin Liu; Lothar Beutin; Jianguo Xu; Yan Ren; Lu Feng; Ruiting Lan; Peter R Reeves; Lei Wang
Journal:  PLoS One       Date:  2010-01-14       Impact factor: 3.240

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