Literature DB >> 17677520

Comment on "Characterization of the tunneling conductance across DNA bases".

Johan Lagerqvist, Michael Zwolak, Massimiliano Di Ventra.   

Abstract

In a recent paper, Zikic [Phys. Rev. E 74, 011919 (2006)] present first-principles calculations of the DNA nucleotides' electrical conductance. They report qualitative and quantitative differences with previous work, in particular with that of Zwolak and Di Ventra [Nano Lett. 5, 421 (2005)] and Lagerqvist [Nano Lett. 6, 779 (2006)]. In this comment we address the alleged discrepancies, showing that they come from a misrepresentation of our research. Further, we discuss in more detail the issue of geometric fluctuations previously investigated by us, and raised again in the work of Zikic In addition, we point out erroneous comments made by Zikic regarding the use of density functional theory calculations in transport.

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Year:  2007        PMID: 17677520     DOI: 10.1103/PhysRevE.76.013901

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  12 in total

1.  Maxwell-Hall access resistance in graphene nanopores.

Authors:  Subin Sahu; Michael Zwolak
Journal:  Phys Chem Chem Phys       Date:  2018-02-14       Impact factor: 3.676

2.  Effect of noise on DNA sequencing via transverse electronic transport.

Authors:  Matt Krems; Michael Zwolak; Yuriy V Pershin; Massimiliano Di Ventra
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

3.  Colloquium: Ionic phenomena in nanoscale pores through 2D materials.

Authors:  Subin Sahu; Michael Zwolak
Journal:  Rev Mod Phys       Date:  2019       Impact factor: 54.494

4.  Communication: Relaxation-limited electronic currents in extended reservoir simulations.

Authors:  Daniel Gruss; Alex Smolyanitsky; Michael Zwolak
Journal:  J Chem Phys       Date:  2017-10-14       Impact factor: 3.488

5.  Controlled translocation of individual DNA molecules through protein nanopores with engineered molecular brakes.

Authors:  Marcela Rincon-Restrepo; Ellina Mikhailova; Hagan Bayley; Giovanni Maglia
Journal:  Nano Lett       Date:  2011-01-11       Impact factor: 11.189

6.  Dehydration and ionic conductance quantization in nanopores.

Authors:  Michael Zwolak; James Wilson; Massimiliano Di Ventra
Journal:  J Phys Condens Matter       Date:  2010-11-17       Impact factor: 2.333

7.  Generalized Voigt broadening due to thermal fluctuations of electromechanical nanosensors and molecular electronic junctions.

Authors:  Maicol A Ochoa; Michael Zwolak
Journal:  J Chem Phys       Date:  2019-04-14       Impact factor: 3.488

8.  Optimal in situ electromechanical sensing of molecular species.

Authors:  Maicol A Ochoa; Michael Zwolak
Journal:  J Chem Phys       Date:  2020-01-21       Impact factor: 3.488

9.  Quantized ionic conductance in nanopores.

Authors:  Michael Zwolak; Johan Lagerqvist; Massimiliano Di Ventra
Journal:  Phys Rev Lett       Date:  2009-09-17       Impact factor: 9.161

10.  Dehydration as a Universal Mechanism for Ion Selectivity in Graphene and Other Atomically Thin Pores.

Authors:  Subin Sahu; Massimiliano Di Ventra; Michael Zwolak
Journal:  Nano Lett       Date:  2017-07-12       Impact factor: 11.189

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