Literature DB >> 17675844

Chromosome repatterning in three representative parrots (Psittaciformes) inferred from comparative chromosome painting.

I Nanda1, E Karl, D K Griffin, M Schartl, M Schmid.   

Abstract

Parrots (order: Psittaciformes) are the most common captive birds and have attracted human fascination since ancient times because of their remarkable intelligence and ability to imitate human speech. However, their genome organization, evolution and genomic relation with other birds are poorly understood. Chromosome painting with DNA probes derived from the flow-sorted macrochromosomes (1-10) of chicken (Gallus gallus, GGA) has been used to identify and distinguish the homoeologous chromosomal segments in three species of parrots, i.e., Agapornis roseicollis (peach-faced lovebird); Nymphicus hollandicus (cockatiel) and Melopsittacus undulatus (budgerigar). The ten GGA macrochromosome paints unequivocally recognize 14 to 16 hybridizing regions delineating the conserved chromosomal segments for the respective chicken macrochromosomes in these representative parrot species. The cross-species chromosome painting results show that, unlike in many other avian karyotypes with high homology to chicken chromosomes, dramatic rearrangements of the macrochromosomes have occurred in parrot lineages. Among the larger GGA macrochromosomes (1-5), chromosomes 1 and 4 are conserved on two chromosomes in all three species. However, the hybridization pattern for GGA 4 in A. roseicollis and M. undulatus is in sharp contrast to the most common pattern known from hybridization of chicken macrochromosome 4 in other avian karyotypes. With the exception of A. roseicollis, chicken chromosomes 2, 3 and 5 hybridized either completely or partially to a single chromosome. In contrast, the smaller GGA macrochromosomes 6, 7 and 8 displayed a complex hybridization pattern: two or three of these macrochromosomes were found to be contiguously arranged on a single chromosome in all three parrot species. Overall, the study shows that translocations and fusions in conjunction with intragenomic rearrangements have played a major role in the karyotype evolution of parrots. Our inter-species chromosome painting results unequivocally illustrate the dynamic reshuffling of ancestral chromosomes among the karyotypes of Psittaciformes. Copyright 2007 S. Karger AG, Basel.

Entities:  

Mesh:

Year:  2007        PMID: 17675844     DOI: 10.1159/000103164

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  27 in total

1.  Novel tools for characterising inter and intra chromosomal rearrangements in avian microchromosomes.

Authors:  Pamela E Lithgow; Rebecca O'Connor; Deborah Smith; Gothami Fonseka; Abdullah Al Mutery; Claudia Rathje; Richard Frodsham; Patricia O'Brien; Fumio Kasai; Malcolm A Ferguson-Smith; Benjamin M Skinner; Darren K Griffin
Journal:  Chromosome Res       Date:  2014-04       Impact factor: 5.239

2.  Intrachromosomal rearrangements in avian genome evolution: evidence for regions prone to breakpoints.

Authors:  B M Skinner; D K Griffin
Journal:  Heredity (Edinb)       Date:  2011-11-02       Impact factor: 3.821

3.  Avian comparative genomics: reciprocal chromosome painting between domestic chicken (Gallus gallus) and the stone curlew (Burhinus oedicnemus, Charadriiformes)--an atypical species with low diploid number.

Authors:  Wenhui Nie; Patricia C M O'Brien; Bee L Ng; Beiyuan Fu; Vitaly Volobouev; Nigel P Carter; Malcolm A Ferguson-Smith; Fengtang Yang
Journal:  Chromosome Res       Date:  2009-01-27       Impact factor: 5.239

4.  Characterization of chromosome structures of Falconinae (Falconidae, Falconiformes, Aves) by chromosome painting and delineation of chromosome rearrangements during their differentiation.

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Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

5.  Genetic Mapping and Biochemical Basis of Yellow Feather Pigmentation in Budgerigars.

Authors:  Thomas F Cooke; Curt R Fischer; Ping Wu; Ting-Xin Jiang; Kathleen T Xie; James Kuo; Elizabeth Doctorov; Ashley Zehnder; Chaitan Khosla; Cheng-Ming Chuong; Carlos D Bustamante
Journal:  Cell       Date:  2017-10-05       Impact factor: 41.582

6.  Chromosomal Diversity and Karyotype Evolution in South American Macaws (Psittaciformes, Psittacidae).

Authors:  Ivanete de Oliveira Furo; Rafael Kretschmer; Patrícia C O'Brien; Malcolm A Ferguson-Smith; Edivaldo Herculano Corrêa de Oliveira
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

7.  Multidirectional chromosome painting substantiates the occurrence of extensive genomic reshuffling within Accipitriformes.

Authors:  Wenhui Nie; Patricia C M O'Brien; Beiyuan Fu; Jinghuan Wang; Weiting Su; Kai He; Bertrand Bed'Hom; Vitaly Volobouev; Malcolm A Ferguson-Smith; Gauthier Dobigny; Fengtang Yang
Journal:  BMC Evol Biol       Date:  2015-09-26       Impact factor: 3.260

8.  Karyotype Evolution and Genomic Organization of Repetitive DNAs in the Saffron Finch, Sicalis flaveola (Passeriformes, Aves).

Authors:  Rafael Kretschmer; Benilson Silva Rodrigues; Suziane Alves Barcellos; Alice Lemos Costa; Marcelo de Bello Cioffi; Analía Del Valle Garnero; Ricardo José Gunski; Edivaldo Herculano Corrêa de Oliveira; Darren K Griffin
Journal:  Animals (Basel)       Date:  2021-05-19       Impact factor: 2.752

9.  A multi-platform draft de novo genome assembly and comparative analysis for the Scarlet Macaw (Ara macao).

Authors:  Christopher M Seabury; Scot E Dowd; Paul M Seabury; Terje Raudsepp; Donald J Brightsmith; Poul Liboriussen; Yvette Halley; Colleen A Fisher; Elaine Owens; Ganesh Viswanathan; Ian R Tizard
Journal:  PLoS One       Date:  2013-05-08       Impact factor: 3.240

10.  Comparative genomics in chicken and Pekin duck using FISH mapping and microarray analysis.

Authors:  Benjamin M Skinner; Lindsay B W Robertson; Helen G Tempest; Elizabeth J Langley; Dimitris Ioannou; Katie E Fowler; Richard P M A Crooijmans; Anthony D Hall; Darren K Griffin; Martin Völker
Journal:  BMC Genomics       Date:  2009-08-05       Impact factor: 3.969

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