Literature DB >> 17668199

Biochemical characterization and phylogenetic analysis of UDP-glucose dehydrogenase from the gellan gum producer Sphingomonas elodea ATCC 31461.

Ana Teresa Granja1, Alma Popescu, Ana Rita Marques, Isabel Sá-Correia, Arsenio M Fialho.   

Abstract

Sphingomonas elodea ATCC 31461 synthesizes in high yield the exopolysaccharide gellan, which is a water-soluble gelling agent with many applications. In this study, we describe the cloning and sequence analysis of the ugdG gene, encoding a UDP-glucose dehydrogenase (47.2 kDa; UDPG-DH; EC 1.1.1.22), required for the synthesis of the gellan gum precursor UDP-glucuronic acid. UgdG protein shows homology to members of the UDP-glucose/GDP-mannose dehydrogenase superfamily. The Neighbor-Joining method was used to determine phylogenetic relationships among prokaryotic and eukaryotic UDPG-DHs. UgdG from S. elodea and UDPG-DHs from Novosphingobium, Zymomonas, Agrobacterium, and Caulobacter species form a divergent phylogenetic group with a close evolutionary relationship with eukaryotic UDPG-DHs. The ugdG gene was recombinantly expressed in Escherichia coli with and N-terminal 6-His tag and purified for biochemical characterization. The enzyme has an optimum temperature and pH of 37 degrees C and 8.7, respectively. The estimated apparent K(m) values for UDP-glucose and NAD(+) were 0.87 and 0.4 mM, respectively. DNA sequencing of chromosomal regions adjacent to ugdG gene and sequence similarity studies suggests that this gene maps together with others presumably involved in the biosynthesis of S. elodea cell wall polysaccharides.

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Year:  2007        PMID: 17668199     DOI: 10.1007/s00253-007-1112-8

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  3 in total

1.  Structure of Burkholderia cepacia UDP-glucose dehydrogenase (UGD) BceC and role of Tyr10 in final hydrolysis of UGD thioester intermediate.

Authors:  Joana Rocha; Alma O Popescu; Patrícia Borges; Dalila Mil-Homens; Leonilde M Moreira; Isabel Sá-Correia; Arsénio M Fialho; Carlos Frazão
Journal:  J Bacteriol       Date:  2011-05-20       Impact factor: 3.490

2.  Cloning, expression, purification, crystallization and preliminary crystallographic studies of UgdG, an UDP-glucose dehydrogenase from Sphingomonas elodea ATCC 31461.

Authors:  Joana Rocha; Ana Teresa Granja; Isabel Sá-Correia; Arsénio Fialho; Carlos Frazão
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-12-25

3.  Structural Characterization of CalS8, a TDP-α-D-Glucose Dehydrogenase Involved in Calicheamicin Aminodideoxypentose Biosynthesis.

Authors:  Shanteri Singh; Karolina Michalska; Lance Bigelow; Michael Endres; Madan K Kharel; Gyorgy Babnigg; Ragothaman M Yennamalli; Craig A Bingman; Andrzej Joachimiak; Jon S Thorson; George N Phillips
Journal:  J Biol Chem       Date:  2015-08-03       Impact factor: 5.157

  3 in total

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