Literature DB >> 17665955

Modular and practical synthesis of 6-substituted pyridin-3-yl C-nucleosides.

Nicolas Joubert1, Radek Pohl, Blanka Klepetérová, Michal Hocek.   

Abstract

A novel modular and practical methodology for preparation of 6-substituted pyridin-3-yl C-nucleosides was developed. The Heck reaction of 2-chloro-5-iodopyridine with a 3'-TBDMS-protected glycal gave a 6-chloropyridin-3-yl nucleoside analogue, which was then desilylated, selectively reduced, and reprotected to give the TBDMS-protected 6-chloropyridin-3-yl C-2'-deoxyribonucleoside as a pure beta-anomer in a total yield of 39% over four steps. This key intermediate was then subjected to a series of palladium-catalyzed cross-coupling reactions, aminations, and alkoxylations to give a series of protected 1beta-(6-alkyl-, 6-aryl-, 6-hetaryl, 6-amino-, and 6-tert-butoxypyridin-3-yl)-2'-deoxyribonucleosides. 6-Unsubstituted pyridin-3-yl C-nucleoside was prepared by catalytic hydrogenation of the chloro derivative and 6-oxopyridine C-nucleoside by treatment of the 6-tert-butoxy derivative with TFA. Deprotection of all the silylated nucleosides by Et3N.3HF gave a series of free C-nucleosides (10 examples).

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Year:  2007        PMID: 17665955     DOI: 10.1021/jo0709504

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  12 in total

1.  Synthesis of 2'-deoxy-9-deaza nucleosides using Heck methodology.

Authors:  Kartik Temburnikar; Kelin Brace; Katherine L Seley-Radtke
Journal:  J Org Chem       Date:  2013-07-05       Impact factor: 4.354

2.  Simple, Efficient Protocols for the Pd-Catalyzed Cross-Coupling Reaction of Aryl Chlorides and Dimethylamine.

Authors:  Brian K Lee; Mark R Biscoe; Stephen L Buchwald
Journal:  Tetrahedron Lett       Date:  2009-07-01       Impact factor: 2.415

3.  Expanding the scope of replicable unnatural DNA: stepwise optimization of a predominantly hydrophobic base pair.

Authors:  Thomas Lavergne; Mélissa Degardin; Denis A Malyshev; Henry T Quach; Kirandeep Dhami; Phillip Ordoukhanian; Floyd E Romesberg
Journal:  J Am Chem Soc       Date:  2013-04-02       Impact factor: 15.419

4.  Nickel-catalyzed cross-electrophile coupling of 2-chloropyridines with alkyl bromides.

Authors:  Daniel A Everson; Joseph A Buonomo; Daniel J Weix
Journal:  Synlett       Date:  2014-01       Impact factor: 2.454

5.  B family DNA polymerases asymmetrically recognize pyrimidines and purines.

Authors:  Travis J Lund; Nisha A Cavanaugh; Nicolas Joubert; Milan Urban; Jennifer N Patro; Michal Hocek; Robert D Kuchta
Journal:  Biochemistry       Date:  2011-07-26       Impact factor: 3.162

Review 6.  Biaryl phosphane ligands in palladium-catalyzed amination.

Authors:  David S Surry; Stephen L Buchwald
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

7.  Herpes simplex virus-1 DNA primase: a remarkably inaccurate yet selective polymerase.

Authors:  Milan Urban; Nicolas Joubert; Michal Hocek; Richard E Alexander; Robert D Kuchta
Journal:  Biochemistry       Date:  2009-11-24       Impact factor: 3.162

8.  2-Methoxypyridine as a Thymidine Mimic in Watson-Crick Base Pairs of DNA and PNA: Synthesis, Thermal Stability, and NMR Structural Studies.

Authors:  Irina Novosjolova; Scott D Kennedy; Eriks Rozners
Journal:  Chembiochem       Date:  2017-09-26       Impact factor: 3.164

9.  Pattern-Based Detection of Anion Pollutants in Water with DNA Polyfluorophores.

Authors:  Hyukin Kwon; Wei Jiang; Eric T Kool
Journal:  Chem Sci       Date:  2015-04-01       Impact factor: 9.825

Review 10.  Recent advances in synthetic approaches for medicinal chemistry of C-nucleosides.

Authors:  Kartik Temburnikar; Katherine L Seley-Radtke
Journal:  Beilstein J Org Chem       Date:  2018-04-05       Impact factor: 2.883

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