Literature DB >> 1766432

The gene for a halophilic glutamate dehydrogenase: sequence, transcription analysis and phylogenetic implications.

N Benachenhou1, G Baldacci.   

Abstract

We have isolated and sequenced the gene for a putative NADP-dependent glutamate dehydrogenase from the extremely halophilic archaebacterium Halobacterium salinarium. This gene is transcribed as a unique RNA molecule of about 1700 nucleotides. The 5' end of the transcript contains characteristic consensus transcription initiation and promoter sequences observed in halophilic archaebacteria. The encoded polypeptide, with a predicted length of 435 amino acids, shows significant overall homology and conservation of functional domains when compared with different eubacterial and eukaryotic glutamate dehydrogenases. Surprisingly, the archaebacterial protein shares a larger number of identical amino acid residues with homologous polypeptides from higher eukaryotes than with those from unicellular eukaryotes and eubacteria.

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Year:  1991        PMID: 1766432     DOI: 10.1007/bf00280290

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  36 in total

1.  Analysis of transcription in the archaebacterium Sulfolobus indicates that archaebacterial promoters are homologous to eukaryotic pol II promoters.

Authors:  W D Reiter; P Palm; W Zillig
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

2.  Nucleotide sequence and regulation of expression of the Aspergillus nidulans gdhA gene encoding NADP dependent glutamate dehydrogenase.

Authors:  A R Hawkins; S J Gurr; P Montague; J R Kinghorn
Journal:  Mol Gen Genet       Date:  1989-07

Review 3.  Structural studies of halophilic proteins, ribosomes, and organelles of bacteria adapted to extreme salt concentrations.

Authors:  H Eisenberg; E J Wachtel
Journal:  Annu Rev Biophys Biophys Chem       Date:  1987

4.  Relatedness of archaebacterial RNA polymerase core subunits to their eubacterial and eukaryotic equivalents.

Authors:  B Berghöfer; L Kröckel; C Körtner; M Truss; J Schallenberg; A Klein
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

Review 5.  Gene structure, organization, and expression in archaebacteria.

Authors:  J W Brown; C J Daniels; J N Reeve
Journal:  Crit Rev Microbiol       Date:  1989       Impact factor: 7.624

6.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

Review 7.  Salt-dependent properties of proteins from extremely halophilic bacteria.

Authors:  J K Lanyi
Journal:  Bacteriol Rev       Date:  1974-09

8.  Kinetic mechanism of Halobacterium halobium NAD+-glutamate dehydrogenase.

Authors:  M J Bonete; M L Camacho; E Cadenas
Journal:  Biochim Biophys Acta       Date:  1989-02-24

9.  Hydrophobic chromatography and fractionation of enzymes from extremely halophilic bacteria using decreasing concentration gradients of ammonium sulfate.

Authors:  M Mevarech; W Leicht; M M Werber
Journal:  Biochemistry       Date:  1976-06-01       Impact factor: 3.162

10.  HMf, a DNA-binding protein isolated from the hyperthermophilic archaeon Methanothermus fervidus, is most closely related to histones.

Authors:  K Sandman; J A Krzycki; B Dobrinski; R Lurz; J N Reeve
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

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  14 in total

1.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

Review 2.  The last universal common ancestor: emergence, constitution and genetic legacy of an elusive forerunner.

Authors:  Nicolas Glansdorff; Ying Xu; Bernard Labedan
Journal:  Biol Direct       Date:  2008-07-09       Impact factor: 4.540

3.  Biochemical and molecular characterization of NADP-glutamate dehydrogenase from the ectomycorrhizal fungus Tuber borchii.

Authors:  Luciana Vallorani; Emanuela Polidori; Cinzia Sacconi; Deborah Agostini; Raffaella Pierleoni; Giovanni Piccoli; Sabrina Zeppa; Vilberto Stocchi
Journal:  New Phytol       Date:  2002-06       Impact factor: 10.151

4.  The conflict between horizontal gene transfer and the safeguard of identity: origin of meiotic sexuality.

Authors:  Nicolas Glansdorff; Ying Xu; Bernard Labedan
Journal:  J Mol Evol       Date:  2009-09-26       Impact factor: 2.395

5.  The NADP+-linked glutamate dehydrogenase from Trypanosoma cruzi: sequence, genomic organization and expression.

Authors:  P Barderi; O Campetella; A C Frasch; J A Santomé; U Hellman; U Pettersson; J J Cazzulo
Journal:  Biochem J       Date:  1998-03-01       Impact factor: 3.857

6.  Higher-plant chloroplast and cytosolic 3-phosphoglycerate kinases: a case of endosymbiotic gene replacement.

Authors:  H Brinkmann; W Martin
Journal:  Plant Mol Biol       Date:  1996-01       Impact factor: 4.076

7.  Evolution of glutamate dehydrogenase genes: evidence for two paralogous protein families and unusual branching patterns of the archaebacteria in the universal tree of life.

Authors:  N Benachenhou-Lahfa; P Forterre; B Labedan
Journal:  J Mol Evol       Date:  1993-04       Impact factor: 2.395

8.  Arabidopsis mutant analysis and gene regulation define a nonredundant role for glutamate dehydrogenase in nitrogen assimilation.

Authors:  R Melo-Oliveira; I C Oliveira; G M Coruzzi
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

9.  Partial sequence of the gene for a serine protease from a halophilic archaeum Haloferax mediterranei R4, and nucleotide sequences of 16S rRNA encoding genes from several halophilic archaea.

Authors:  M Kamekura; Y Seno
Journal:  Experientia       Date:  1993-07-05

10.  In vivo definition of an archaeal promoter.

Authors:  J R Palmer; C J Daniels
Journal:  J Bacteriol       Date:  1995-04       Impact factor: 3.490

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