Literature DB >> 17662965

Regulation of photoreceptor gene expression by Crx-associated transcription factor network.

Anne K Hennig1, Guang-Hua Peng, Shiming Chen.   

Abstract

Rod and cone photoreceptors in the mammalian retina are special types of neurons that are responsible for phototransduction, the first step of vision. Development and maintenance of photoreceptors require precisely regulated gene expression. This regulation is mediated by a network of photoreceptor transcription factors centered on Crx, an Otx-like homeodomain transcription factor. The cell type (subtype) specificity of this network is governed by factors that are preferentially expressed by rods or cones or both, including the rod-determining factors neural retina leucine zipper protein (Nrl) and the orphan nuclear receptor Nr2e3; and cone-determining factors, mostly nuclear receptor family members. The best-documented of these include thyroid hormone receptor beta2 (Tr beta2), retinoid related orphan receptor Ror beta, and retinoid X receptor Rxr gamma. The appropriate function of this network also depends on general transcription factors and cofactors that are ubiquitously expressed, such as the Sp zinc finger transcription factors and STAGA co-activator complexes. These cell type-specific and general transcription regulators form complex interactomes; mutations that interfere with any of the interactions can cause photoreceptor development defects or degeneration. In this manuscript, we review recent progress on the roles of various photoreceptor transcription factors and interactions in photoreceptor subtype development. We also provide evidence of auto-, para-, and feedback regulation among these factors at the transcriptional level. These protein-protein and protein-promoter interactions provide precision and specificity in controlling photoreceptor subtype-specific gene expression, development, and survival. Understanding these interactions may provide insights to more effective therapeutic interventions for photoreceptor diseases.

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Year:  2007        PMID: 17662965      PMCID: PMC2266892          DOI: 10.1016/j.brainres.2007.06.036

Source DB:  PubMed          Journal:  Brain Res        ISSN: 0006-8993            Impact factor:   3.252


  144 in total

1.  Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development.

Authors:  Akihiro Nishida; Akiko Furukawa; Chieko Koike; Yasuo Tano; Shinichi Aizawa; Isao Matsuo; Takahisa Furukawa
Journal:  Nat Neurosci       Date:  2003-11-16       Impact factor: 24.884

Review 2.  Gene silencing by the thyroid hormone receptor.

Authors:  Maren Eckey; Udo Moehren; Aria Baniahmad
Journal:  Mol Cell Endocrinol       Date:  2003-12-31       Impact factor: 4.102

Review 3.  Retinal cell fate determination and bHLH factors.

Authors:  Jun Hatakeyama; Ryoichiro Kageyama
Journal:  Semin Cell Dev Biol       Date:  2004-02       Impact factor: 7.727

Review 4.  Thyroid hormone and retinal development: an emerging field.

Authors:  Sanjiv Harpavat; Constance L Cepko
Journal:  Thyroid       Date:  2003-11       Impact factor: 6.568

5.  Photoreceptor-specific nuclear receptor NR2E3 functions as a transcriptional activator in rod photoreceptors.

Authors:  Hong Cheng; Hemant Khanna; Edwin C T Oh; David Hicks; Kenneth P Mitton; Anand Swaroop
Journal:  Hum Mol Genet       Date:  2004-06-09       Impact factor: 6.150

6.  Expression of photoreceptor-specific nuclear receptor NR2E3 in rod photoreceptors of fetal human retina.

Authors:  Keely M Bumsted O'Brien; Hong Cheng; Yibin Jiang; Dorothea Schulte; Anand Swaroop; Anita E Hendrickson
Journal:  Invest Ophthalmol Vis Sci       Date:  2004-08       Impact factor: 4.799

7.  QRX, a novel homeobox gene, modulates photoreceptor gene expression.

Authors:  Qing-liang Wang; Shiming Chen; Noriko Esumi; Prabodh K Swain; Heidi S Haines; Guanghua Peng; B Michele Melia; Iain McIntosh; John R Heckenlively; Samuel G Jacobson; Edwin M Stone; Anand Swaroop; Donald J Zack
Journal:  Hum Mol Genet       Date:  2004-03-17       Impact factor: 6.150

8.  Interference of Crx-dependent transcription by ataxin-7 involves interaction between the glutamine regions and requires the ataxin-7 carboxy-terminal region for nuclear localization.

Authors:  Shiming Chen; Guang-Hua Peng; Xuejiao Wang; Annette C Smith; Sara K Grote; Bryce L Sopher; Albert R La Spada
Journal:  Hum Mol Genet       Date:  2003-11-12       Impact factor: 6.150

9.  Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl.

Authors:  Shigeo Yoshida; Alan J Mears; James S Friedman; Todd Carter; Shirley He; Edwin Oh; Yuezhou Jing; Rafal Farjo; Gilles Fleury; Carrolee Barlow; Alfred O Hero; Anand Swaroop
Journal:  Hum Mol Genet       Date:  2004-05-26       Impact factor: 6.150

10.  Otd/Crx, a dual regulator for the specification of ommatidia subtypes in the Drosophila retina.

Authors:  Ali Tahayato; Remi Sonneville; Franck Pichaud; Mathias F Wernet; Dmitri Papatsenko; Philippe Beaufils; Tiffany Cook; Claude Desplan
Journal:  Dev Cell       Date:  2003-09       Impact factor: 12.270

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  93 in total

1.  The long noncoding RNA Vax2os1 controls the cell cycle progression of photoreceptor progenitors in the mouse retina.

Authors:  Nicola Meola; Mariateresa Pizzo; Giovanna Alfano; Enrico Maria Surace; Sandro Banfi
Journal:  RNA       Date:  2011-11-29       Impact factor: 4.942

2.  A 350 bp region of the proximal promoter of Rds drives cell-type specific gene expression.

Authors:  Xue Cai; Shannon M Conley; Tong Cheng; Muayyad R Al-Ubaidi; Muna I Naash
Journal:  Exp Eye Res       Date:  2010-05-04       Impact factor: 3.467

3.  Differential expression of neuronal genes in Müller glia in two- and three-dimensional cultures.

Authors:  M Joseph Phillips; Deborah C Otteson
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-03-14       Impact factor: 4.799

4.  Onecut 1 and Onecut 2 are potential regulators of mouse retinal development.

Authors:  Fuguo Wu; Darshan Sapkota; Renzhong Li; Xiuqian Mu
Journal:  J Comp Neurol       Date:  2012-04-01       Impact factor: 3.215

5.  Active opsin loci adopt intrachromosomal loops that depend on the photoreceptor transcription factor network.

Authors:  Guang-Hua Peng; Shiming Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

Review 6.  Development of the Vertebrate Eye and Retina.

Authors:  Deborah L Stenkamp
Journal:  Prog Mol Biol Transl Sci       Date:  2015-07-02       Impact factor: 3.622

Review 7.  Vision from next generation sequencing: multi-dimensional genome-wide analysis for producing gene regulatory networks underlying retinal development, aging and disease.

Authors:  Hyun-Jin Yang; Rinki Ratnapriya; Tiziana Cogliati; Jung-Woong Kim; Anand Swaroop
Journal:  Prog Retin Eye Res       Date:  2015-02-07       Impact factor: 21.198

8.  Structural organization and expression pattern of the canine RPGRIP1 isoforms in retinal tissue.

Authors:  Tatyana Kuznetsova; Barbara Zangerl; Orly Goldstein; Gregory M Acland; Gustavo D Aguirre
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-05-06       Impact factor: 4.799

9.  Reduction of Glut1 in the Neural Retina But Not the RPE Alleviates Polyol Accumulation and Normalizes Early Characteristics of Diabetic Retinopathy.

Authors:  Nicholas C Holoman; Jacob J Aiello; Timothy D Trobenter; Matthew J Tarchick; Michael R Kozlowski; Emily R Makowski; Darryl C De Vivo; Charandeep Singh; Jonathan E Sears; Ivy S Samuels
Journal:  J Neurosci       Date:  2021-02-23       Impact factor: 6.167

10.  Mutation discovered in a feline model of human congenital retinal blinding disease.

Authors:  Marilyn Menotti-Raymond; Koren Holland Deckman; Victor David; Jaimie Myrkalo; Stephen J O'Brien; Kristina Narfström
Journal:  Invest Ophthalmol Vis Sci       Date:  2010-01-06       Impact factor: 4.799

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