Literature DB >> 17646989

Mathematical foundations of the dendritic growth models.

José A Villacorta1, Jorge Castro, Pilar Negredo, Carlos Avendaño.   

Abstract

At present two growth models describe successfully the distribution of size and topological complexity in populations of dendritic trees with considerable accuracy and simplicity, the BE model (Van Pelt et al. in J. Comp. Neurol. 387:325-340, 1997) and the S model (Van Pelt and Verwer in Bull. Math. Biol. 48:197-211, 1986). This paper discusses the mathematical basis of these models and analyzes quantitatively the relationship between the BE model and the S model assumed in the literature by developing a new explicit equation describing the BES model (a dendritic growth model integrating the features of both preceding models; Van Pelt et al. in J. Comp. Neurol. 387:325-340, 1997). In numerous studies it is implicitly presupposed that the S model is conditionally linked to the BE model (Granato and Van Pelt in Brain Res. Dev. Brain Res. 142:223-227, 2003; Uylings and Van Pelt in Network 13:397-414, 2002; Van Pelt, Dityatev and Uylings in J. Comp. Neurol. 387:325-340, 1997; Van Pelt and Schierwagen in Math. Biosci. 188:147-155, 2004; Van Pelt and Uylings in Network. 13:261-281, 2002; Van Pelt, Van Ooyen and Uylings in Modeling Dendritic Geometry and the Development of Nerve Connections, pp 179, 2000). In this paper we prove the non-exactness of this assumption, quantify involved errors and determine the conditions under which the BE and S models can be separately used instead of the BES model, which is more exact but considerably more difficult to apply. This study leads to a novel expression describing the BE model in an analytical closed form, much more efficient than the traditional iterative equation (Van Pelt et al. in J. Comp. Neurol. 387:325-340, 1997) in many neuronal classes. Finally we propose a new algorithm in order to obtain the values of the parameters of the BE model when this growth model is matched to experimental data, and discuss its advantages and improvements over the more commonly used procedures.

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Year:  2007        PMID: 17646989     DOI: 10.1007/s00285-007-0113-7

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  18 in total

1.  Morphological analysis and modeling of neuronal dendrites.

Authors:  Jaap van Pelt; Andreas Schierwagen
Journal:  Math Biosci       Date:  2004 Mar-Apr       Impact factor: 2.144

Review 2.  Measures for quantifying dendritic arborizations.

Authors:  Harry B M Uylings; Jaap van Pelt
Journal:  Network       Date:  2002-08       Impact factor: 1.273

3.  Neuroanatomical algorithms for dendritic modelling.

Authors:  Giorgio A Ascoli
Journal:  Network       Date:  2002-08       Impact factor: 1.273

4.  Branching rates and growth functions in the outgrowth of dendritic branching patterns.

Authors:  Jaap van Pelt; Harry B M Uylings
Journal:  Network       Date:  2002-08       Impact factor: 1.273

5.  Comparison of the topology and growth rules of motoneuronal dendrites.

Authors:  A E Dityatev; N M Chmykhova; L Studer; O A Karamian; V M Kozhanov; H P Clamann
Journal:  J Comp Neurol       Date:  1995-12-18       Impact factor: 3.215

6.  Parameter estimation in topological analysis of binary tree structures.

Authors:  R W Verwer; J Van Pelt; A J Noest
Journal:  Bull Math Biol       Date:  1987       Impact factor: 1.758

7.  Topological properties of binary trees grown with order-dependent branching probabilities.

Authors:  J Van Pelt; R W Verwer
Journal:  Bull Math Biol       Date:  1986       Impact factor: 1.758

8.  A computational model of dendrite elongation and branching based on MAP2 phosphorylation.

Authors:  T A Hely; B Graham; A V Ooyen
Journal:  J Theor Biol       Date:  2001-06-07       Impact factor: 2.691

9.  Effects of early ethanol exposure on dendrite growth of cortical pyramidal neurons: inferences from a computational model.

Authors:  Alberto Granato; Jaap Van Pelt
Journal:  Brain Res Dev Brain Res       Date:  2003-05-14

10.  Dynamic remodeling of dendritic arbors in GABAergic interneurons of adult visual cortex.

Authors:  Wei-Chung Allen Lee; Hayden Huang; Guoping Feng; Joshua R Sanes; Emery N Brown; Peter T So; Elly Nedivi
Journal:  PLoS Biol       Date:  2005-12-27       Impact factor: 8.029

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  3 in total

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Journal:  Biomech Model Mechanobiol       Date:  2022-01-07

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Authors:  Toma Marinov; Haven A López Sánchez; Liang Yuchi; Dayo O Adewole; D Kacy Cullen; Reuben H Kraft
Journal:  In Silico Biol       Date:  2020

3.  Benchmarking of tools for axon length measurement in individually-labeled projection neurons.

Authors:  Mario Rubio-Teves; Sergio Díez-Hermano; César Porrero; Abel Sánchez-Jiménez; Lucía Prensa; Francisco Clascá; María García-Amado; José Antonio Villacorta-Atienza
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