Literature DB >> 17635109

FRET studies with factor X mutants provide insight into the topography of the membrane-bound factor X/Xa.

Shabir H Qureshi1, Likui Yang, Subramanian Yegneswaran, Alireza R Rezaie.   

Abstract

FRET (fluorescence resonance energy transfer) studies have shown that the vitamin K-dependent coagulation proteases bind to membrane surfaces perpendicularly, positioning their active sites above the membrane surfaces. To investigate whether EGF (epidermal growth factor) domains of these proteases play a spacer function in this model of the membrane interaction, we used FRET to measure the distance between the donor fluorescein dye in the active sites of Fl-FPR (fluorescein-D-Phe-Pro-Arg-chloromethane)-inhibited fXa (activated Factor Xa) and its N-terminal EGF deletion mutant (fXa-desEGF1), and the acceptor OR (octadecylrhodamine) dye incorporated into phospholipid vesicles composed of 80% phosphatidylcholine and 20% phosphatidylserine. The average distance of closest approach (L) between fluorescein in the active site and OR at the vesicle surface was determined to be 56+/-1 A (1 A=0.1 nm) and 63+/-1 A for fXa-desEGF1 compared with 72+/-2 A and 75+/-1 A for fXa, in the absence and presence of fVa (activated Factor V) respectively, assuming kappa2=2/3. In comparison, an L value of 95+/-6 A was obtained for a S195C mutant of fXa in the absence of fVa in which fluorescein was attached directly to Cys(195) of fXa. These results suggest that (i) EGF1 plays a spacer function in holding the active site of fXa above the membrane surface, (ii) the average distance between fluorescein attached to Fl-FPR in the active site of fXa and OR at the vesicle surface may not reflect the actual distance of the active-site residue relative to the membrane surface, and (iii) fVa alters the orientation and/or the height of residue 195 above the membrane surface.

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Year:  2007        PMID: 17635109      PMCID: PMC2275069          DOI: 10.1042/BJ20070735

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  34 in total

1.  Zymogenic and enzymatic properties of the 70-80 loop mutants of factor X/Xa.

Authors:  Lin Chen; Chandrashekhara Manithody; Likui Yang; Alireza R Rezaie
Journal:  Protein Sci       Date:  2004-02       Impact factor: 6.725

2.  Role of the Gla and first epidermal growth factor-like domains of factor X in the prothrombinase and tissue factor-factor VIIa complexes.

Authors:  Fabrice Thiec; Ghislaine Cherel; Olivier D Christophe
Journal:  J Biol Chem       Date:  2003-01-15       Impact factor: 5.157

3.  Structure of the prothrombin- and blood clotting factor X-membrane complexes.

Authors:  T K Lim; V A Bloomfield; G L Nelsestuen
Journal:  Biochemistry       Date:  1977-09-20       Impact factor: 3.162

4.  Geometric packing constraints in egg phosphatidylcholine vesicles.

Authors:  C Huang; J T Mason
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

Review 5.  Blood coagulation.

Authors:  C M Jackson; Y Nemerson
Journal:  Annu Rev Biochem       Date:  1980       Impact factor: 23.643

6.  The tissue factor region that interacts with factor Xa in the activation of factor VII.

Authors:  D Kirchhofer; C Eigenbrot; M T Lipari; P Moran; M Peek; R F Kelley
Journal:  Biochemistry       Date:  2001-01-23       Impact factor: 3.162

7.  The tissue factor/factor VIIa/factor Xa complex: a model built by docking and site-directed mutagenesis.

Authors:  Brian V Norledge; Ramona J Petrovan; Wolfram Ruf; Arthur J Olson
Journal:  Proteins       Date:  2003-11-15

8.  The critical role of the 185-189-loop in the factor Xa interaction with Na+ and factor Va in the prothrombinase complex.

Authors:  Alireza R Rezaie; Farooqahmed S Kittur
Journal:  J Biol Chem       Date:  2004-09-03       Impact factor: 5.157

9.  The role of phospholipids and factor Va in the prothrombinase complex.

Authors:  J Rosing; G Tans; J W Govers-Riemslag; R F Zwaal; H C Hemker
Journal:  J Biol Chem       Date:  1980-01-10       Impact factor: 5.157

10.  Role of the N-terminal epidermal growth factor-like domain of factor X/Xa.

Authors:  Farooqahmed S Kittur; Chandrashekhara Manithody; Alireza R Rezaie
Journal:  J Biol Chem       Date:  2004-04-06       Impact factor: 5.157

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  11 in total

1.  Autolysis loop restricts the specificity of activated protein C: analysis by FRET and functional assays.

Authors:  Shabir H Qureshi; Chandrashekhara Manithody; Jong-Sup Bae; Likui Yang; Alireza R Rezaie
Journal:  Biophys Chem       Date:  2008-02-25       Impact factor: 2.352

2.  Membrane-dependent interaction of factor Xa and prothrombin with factor Va in the prothrombinase complex.

Authors:  Shabir H Qureshi; Likui Yang; Chandrashekhara Manithody; Alireza R Rezaie
Journal:  Biochemistry       Date:  2009-06-09       Impact factor: 3.162

3.  Contribution of the NH2-terminal EGF-domain of factor IXa to the specificity of intrinsic tenase.

Authors:  Shabir H Qureshi; Likui Yang; Alireza R Rezaie
Journal:  Thromb Haemost       Date:  2012-09-26       Impact factor: 5.249

4.  Residues of the 39-loop restrict the plasma inhibitor specificity of factor IXa.

Authors:  Likui Yang; Alireza R Rezaie
Journal:  J Biol Chem       Date:  2013-03-25       Impact factor: 5.157

5.  Phosphatidylserine and FVa regulate FXa structure.

Authors:  Kinshuk Raj Srivasatava; Rinku Majumder; William H Kane; Mary Ann Quinn-Allen; Barry R Lentz
Journal:  Biochem J       Date:  2014-04-01       Impact factor: 3.857

6.  Functional properties and active-site topographies of factor X Gla- and prothrombin Gla-domain chimeras of activated protein C.

Authors:  Shabir H Qureshi; Likui Yang; Chandrashekhara Manithody; Jong-Sup Bae; Alireza R Rezaie
Journal:  Biochim Biophys Acta       Date:  2008-05-19

7.  Protein Z-dependent protease inhibitor binds to the C-terminal domain of protein Z.

Authors:  Alireza R Rezaie; Jong-Sup Bae; Chandrashekhara Manithody; Shabir H Qureshi; Likui Yang
Journal:  J Biol Chem       Date:  2008-05-23       Impact factor: 5.157

8.  How the Linker Connecting the Two Kringles Influences Activation and Conformational Plasticity of Prothrombin.

Authors:  Nicola Pozzi; Zhiwei Chen; Enrico Di Cera
Journal:  J Biol Chem       Date:  2016-01-12       Impact factor: 5.157

9.  Lyso-Sulfatide Binds Factor Xa and Inhibits Thrombin Generation by the Prothrombinase Complex.

Authors:  Subramanian Yegneswaran; Yajnavalka Banerjee; José A Fernández; Hiroshi Deguchi; John H Griffin
Journal:  PLoS One       Date:  2015-08-11       Impact factor: 3.240

Review 10.  Structure of Coagulation Factor II: Molecular Mechanism of Thrombin Generation and Development of Next-Generation Anticoagulants.

Authors:  Mathivanan Chinnaraj; William Planer; Nicola Pozzi
Journal:  Front Med (Lausanne)       Date:  2018-10-02
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