Literature DB >> 17620720

Crystallization and preliminary X-ray analysis of BigR, a transcription repressor from Xylella fastidiosa involved in biofilm formation.

Rosicler Lázaro Barbosa1, Fábio Cupri Rinaldi, Beatriz Gomes Guimarães, Celso Eduardo Benedetti.   

Abstract

BigR (biofilm growth-associated repressor) is a novel repressor protein that regulates the transcription of an operon implicated in biofilm growth in both Xylella fastidiosa and Agrobacterium tumefaciens. This protein binds to a palindromic TA-rich element located in the promoter of the BigR operon and strongly represses transcription of the operon. BigR contains a helix-turn-helix (HTH) domain that is found in some members of the ArsR/SmtB family of metal sensors, which control metal resistance in bacteria. Although functional studies have suggested that BigR does not act as a metal sensor, the presence of two cysteines and a methionine in its primary structure raised the possibility of BigR being a metal-ligand protein. In order to gain new insights into the protein structure and its possible interaction with a metal ion or effector ligand, BigR from X. fastidiosa was crystallized in native and selenomethionine (SeMet) labelled forms using the hanging-drop vapour-diffusion method. X-ray diffraction data were collected from native and SeMet crystals to resolutions of 1.95 and 2.2 A, respectively. Both crystals belong to space group P321 and contain one molecule per asymmetric unit.

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Year:  2007        PMID: 17620720      PMCID: PMC2335149          DOI: 10.1107/S1744309107028722

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  8 in total

1.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

2.  The CCP4 suite: programs for protein crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

3.  Culture and serological detection of the xylem-limited bacterium causing citrus variegated chlorosis and its identification as a strain ofXylella fastidiosa.

Authors:  C J Chang; M Garnier; L Zreik; V Rossetti; J M Bové
Journal:  Curr Microbiol       Date:  1993-09       Impact factor: 2.188

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

6.  Pierce's disease of grapevines: isolation of the causal bacterium.

Authors:  M J Davis; A H Purcell; S V Thomson
Journal:  Science       Date:  1978-01-06       Impact factor: 47.728

7.  Cell-cell signaling controls Xylella fastidiosa interactions with both insects and plants.

Authors:  Karyn L Newman; Rodrigo P P Almeida; Alexander H Purcell; Steven E Lindow
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-30       Impact factor: 11.205

Review 8.  The SmtB/ArsR family of metalloregulatory transcriptional repressors: Structural insights into prokaryotic metal resistance.

Authors:  Laura S Busenlehner; Mario A Pennella; David P Giedroc
Journal:  FEMS Microbiol Rev       Date:  2003-06       Impact factor: 16.408

  8 in total
  4 in total

1.  Sulfide-responsive transcriptional repressor SqrR functions as a master regulator of sulfide-dependent photosynthesis.

Authors:  Takayuki Shimizu; Jiangchuan Shen; Mingxu Fang; Yixiang Zhang; Koichi Hori; Jonathan C Trinidad; Carl E Bauer; David P Giedroc; Shinji Masuda
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-14       Impact factor: 11.205

2.  A Cu(I)-sensing ArsR family metal sensor protein with a relaxed metal selectivity profile.

Authors:  Tong Liu; Xiaohua Chen; Zhen Ma; Jacob Shokes; Lars Hemmingsen; Robert A Scott; David P Giedroc
Journal:  Biochemistry       Date:  2008-09-17       Impact factor: 3.162

3.  Plant pathogenic bacteria utilize biofilm growth-associated repressor (BigR), a novel winged-helix redox switch, to control hydrogen sulfide detoxification under hypoxia.

Authors:  Beatriz G Guimarães; Rosicler L Barbosa; Adriana S Soprano; Bruna M Campos; Tiago A de Souza; Celisa C C Tonoli; Adriana F P Leme; Mario T Murakami; Celso E Benedetti
Journal:  J Biol Chem       Date:  2011-06-01       Impact factor: 5.157

4.  Proteome Biomarkers in Xylem Reveal Pierce's Disease Tolerance in Grape.

Authors:  Ramesh Katam; Kundai Chibanguza; Lekan M Latinwo; Danyel Smith
Journal:  J Proteomics Bioinform       Date:  2015
  4 in total

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