Literature DB >> 17608836

Functional genomic approach to identify novel genes involved in the regulation of oxidative stress resistance and animal lifespan.

Yongsoon Kim1, Hong Sun.   

Abstract

Genetic studies in many organisms suggest that an increased animal lifespan phenotype is often accompanied by enhanced resistance toward reactive oxygen species (ROS). In Caenorhabditis elegans, mutations in daf-2, which encode an insulin/insulin-like growth factor 1 receptor-like molecule, lead to an extended animal lifespan and increased resistance to ROS. We have optimized an assay to monitor ROS resistance in worms using the ROS-generating chemical paraquat. We have employed this assay to screen the RNAi library along chromosomes III and IV for genes that, when silenced, confer paraquat resistance. The positive RNAi clones were subsequently screened for a lifespan extension phenotype. Using this approach, we have identified 84 genes that, when inactivated by RNAi, lead to significant increases in animal lifespan. Among the 84 genes, 29 were found to act in a manner dependent on daf-16. DAF-16, a forkhead transcription factor, is known to integrate signals from multiple pathways, including the daf-2 pathway, to regulate animal lifespan. Most of the 84 genes have not been previously linked to aging, and potentially participate in important cellular processes such as signal transduction, cell-cell interaction, gene expression, protein degradation, and energy metabolism. Our screen has also identified a group of genes that potentially function in a nutrient-sensing pathway to regulate lifespan in C. elegans. Our study provides a novel approach to identify genes involved in the regulation of aging.

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Year:  2007        PMID: 17608836     DOI: 10.1111/j.1474-9726.2007.00302.x

Source DB:  PubMed          Journal:  Aging Cell        ISSN: 1474-9718            Impact factor:   9.304


  54 in total

Review 1.  Gadd45 proteins: relevance to aging, longevity and age-related pathologies.

Authors:  Alexey A Moskalev; Zeljka Smit-McBride; Mikhail V Shaposhnikov; Ekaterina N Plyusnina; Alex Zhavoronkov; Arie Budovsky; Robi Tacutu; Vadim E Fraifeld
Journal:  Ageing Res Rev       Date:  2011-10-05       Impact factor: 10.895

2.  Systematic identification of gene activities promoting hypoxic death.

Authors:  Meghann E Mabon; Xianrong Mao; York Jiao; Barbara A Scott; C Michael Crowder
Journal:  Genetics       Date:  2008-12-01       Impact factor: 4.562

3.  Identification of mutations that delay somatic or reproductive aging of Caenorhabditis elegans.

Authors:  Stacie E Hughes; Cheng Huang; Kerry Kornfeld
Journal:  Genetics       Date:  2011-07-12       Impact factor: 4.562

Review 4.  Functional genomic screening approaches in mechanistic toxicology and potential future applications of CRISPR-Cas9.

Authors:  Hua Shen; Cliona M McHale; Martyn T Smith; Luoping Zhang
Journal:  Mutat Res Rev Mutat Res       Date:  2015-01-25       Impact factor: 5.657

5.  Decreased energy metabolism extends life span in Caenorhabditis elegans without reducing oxidative damage.

Authors:  Jeremy Michael Van Raamsdonk; Yan Meng; Darius Camp; Wen Yang; Xihua Jia; Claire Bénard; Siegfried Hekimi
Journal:  Genetics       Date:  2010-04-09       Impact factor: 4.562

Review 6.  The cell biology of autophagy in metazoans: a developing story.

Authors:  Alicia Meléndez; Thomas P Neufeld
Journal:  Development       Date:  2008-08       Impact factor: 6.868

Review 7.  RNAi screens to identify components of gene networks that modulate aging in Caenorhabditis elegans.

Authors:  Zhuoyu Ni; Siu Sylvia Lee
Journal:  Brief Funct Genomics       Date:  2010-01-06       Impact factor: 4.241

8.  Mitochondrial Stress Restores the Heat Shock Response and Prevents Proteostasis Collapse during Aging.

Authors:  Johnathan Labbadia; Renee M Brielmann; Mario F Neto; Yi-Fan Lin; Cole M Haynes; Richard I Morimoto
Journal:  Cell Rep       Date:  2017-11-07       Impact factor: 9.423

Review 9.  Molecular Functions of Glycoconjugates in Autophagy.

Authors:  Kamau Fahie; Natasha E Zachara
Journal:  J Mol Biol       Date:  2016-06-23       Impact factor: 5.469

10.  Caenorhabditis elegans PI3K mutants reveal novel genes underlying exceptional stress resistance and lifespan.

Authors:  Srinivas Ayyadevara; Cagdaş Tazearslan; Puneet Bharill; Ramani Alla; Eric Siegel; Robert J Shmookler Reis
Journal:  Aging Cell       Date:  2009-09-17       Impact factor: 9.304

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