Literature DB >> 17602768

Mass-spectrometry based minisequencing method for the rapid detection of drug resistance in Mycobacterium tuberculosis.

Larisa N Ikryannikova1, Maxim V Afanas'ev, Tat'yana A Akopian, Elena N Il'ina, Aleksey V Kuz'min, Elena E Larionova, Tat'yana G Smirnova, Larisa N Chernousova, Vadim M Govorun.   

Abstract

A MALDI TOF MS based minisequencing method has been developed and applied for the analysis of rifampin (RIF)- and isoniazid (INH)-resistant M. tuberculosis strains. Eight genetic markers of RIF resistance-nucleotide polymorphisms located in RRDR of rpoB gene, and three of INH resistance including codon 315 of katG gene and -8 and -15 positions of the promoter region of fabG1-inhA operon were worked out. Based on the analysis of 100 M. tuberculosis strains collected from the Moscow region in 1997-2005 we deduced that 91% of RIF-resistant and 94% of INH-resistant strains can be identified using the technique suggested. The approach is rapid, reliable and allows to reveal the drug resistance of M. tuberculosis strains within 12 h after sample isolation.

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Year:  2007        PMID: 17602768     DOI: 10.1016/j.mimet.2007.05.015

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  11 in total

Review 1.  Matrix-assisted laser desorption ionization-time of flight (maldi-tof) mass spectrometry for detection of antibiotic resistance mechanisms: from research to routine diagnosis.

Authors:  Jaroslav Hrabák; Eva Chudácková; Radka Walková
Journal:  Clin Microbiol Rev       Date:  2013-01       Impact factor: 26.132

2.  Rapid detection of MDR-Mycobacterium tuberculosis using modified PCR-SSCP from clinical Specimens.

Authors:  Imani Fooladi Abbas Ali; Farzam Babak; Mousavi Seyed Fazlollah; Jonaidi Jafari Nematollah
Journal:  Asian Pac J Trop Biomed       Date:  2014-05

3.  Rapid Identification of Methicillin-Resistant Staphylococcus aureus (MRSA) by the Vitek MS Saramis system.

Authors:  Weiguang Shan; Jiaping Li; Ying Fang; Xuan Wang; Danxia Gu; Rong Zhang
Journal:  Curr Microbiol       Date:  2015-09-15       Impact factor: 2.188

4.  Molecular typing of Mycobacterium tuberculosis circulated in Moscow, Russian Federation.

Authors:  M V Afanas'ev; L N Ikryannikova; E N Il'ina; A V Kuz'min; E E Larionova; T G Smirnova; L N Chernousova; V M Govorun
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-10-13       Impact factor: 3.267

5.  Relation between genetic markers of drug resistance and susceptibility profile of clinical Neisseria gonorrhoeae strains.

Authors:  Elena N Ilina; Vladimir A Vereshchagin; Alexandra D Borovskaya; Maja V Malakhova; Sergei V Sidorenko; Nazar C Al-Khafaji; Anna A Kubanova; Vadim M Govorun
Journal:  Antimicrob Agents Chemother       Date:  2008-03-31       Impact factor: 5.191

6.  Application status of MALDI-TOF mass spectrometry in the identification and drug resistance of Mycobacterium tuberculosis.

Authors:  Ruixue Zhang; Yin Long; Wenfang He; Xiaoke Hao; Jiayun Liu
Journal:  J Thorac Dis       Date:  2014-05       Impact factor: 2.895

Review 7.  Emerging rapid resistance testing methods for clinical microbiology laboratories and their potential impact on patient management.

Authors:  Hagen Frickmann; Wycliffe Omurwa Masanta; Andreas E Zautner
Journal:  Biomed Res Int       Date:  2014-09-17       Impact factor: 3.411

8.  Rapid detection of porins by matrix-assisted laser desorption/ionization-time of flight mass spectrometry.

Authors:  Yan-Yan Hu; Jia-Chang Cai; Hong-Wei Zhou; Rong Zhang; Gong-Xiang Chen
Journal:  Front Microbiol       Date:  2015-08-04       Impact factor: 5.640

9.  MALDI-TOF MS based carbapenemase detection from culture isolates and from positive blood culture vials.

Authors:  B Ghebremedhin; A Halstenbach; M Smiljanic; M Kaase; P Ahmad-Nejad
Journal:  Ann Clin Microbiol Antimicrob       Date:  2016-02-02       Impact factor: 3.944

10.  A novel RFLP-ARMS TaqMan PCR-based method for detecting the BRAF V600E mutation in melanoma.

Authors:  Yunqing Zhang; Shoufang Qu; Jinyin Zhao; Ting Yu; Liping Guo; Songchao Yin; Xiaoxu Hu; Weijun Chen; Wei Lai; Jie Huang
Journal:  Oncol Lett       Date:  2018-05-30       Impact factor: 2.967

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