Literature DB >> 17601829

INCREASED SIZE EXCLUSION LIMIT 2 encodes a putative DEVH box RNA helicase involved in plasmodesmata function during Arabidopsis embryogenesis.

Ken Kobayashi1, Marisa S Otegui, Sujatha Krishnakumar, Michael Mindrinos, Patricia Zambryski.   

Abstract

Here, we characterize the Arabidopsis thaliana embryo-defective mutant increased size exclusion limit2 (ise2). In contrast with wild-type embryos, ise2 mutants continue to traffic 10-kD fluorescent dextran in the mid-torpedo stage of development. ise2 embryos contain branched as well as simple plasmodesmata (PD) compared with wild-type embryos, which only contain simple PD. Positional cloning reveals that the ISE2 gene encodes a putative DEVH box RNA helicase that shares sequence homology with RNA helicases involved in RNA degradation pathways in other organisms. ISE2 localizes to granule-like structures in the cytoplasm. These granules increase in number when plant cells are stressed. These features are characteristic of stress granules (SGs) in mammalian cells, suggesting that ISE2 granules represent plant-specific SGs. Genetic data demonstrate that the ISE2 helicase is involved in posttranscriptional gene silencing and the determination of cell fate. These data together suggest that ISE2 function affects PD structure and function through the regulation of RNA metabolism and consequent gene expression.

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Year:  2007        PMID: 17601829      PMCID: PMC1955720          DOI: 10.1105/tpc.106.045666

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  54 in total

1.  An mRNA surveillance mechanism that eliminates transcripts lacking termination codons.

Authors:  Pamela A Frischmeyer; Ambro van Hoof; Kathryn O'Donnell; Anthony L Guerrerio; Roy Parker; Harry C Dietz
Journal:  Science       Date:  2002-03-22       Impact factor: 47.728

2.  Embryogenesis in Higher Plants: An Overview.

Authors:  MAL. West; J. J. Harada
Journal:  Plant Cell       Date:  1993-10       Impact factor: 11.277

3.  Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa.

Authors:  Toru Sengoku; Osamu Nureki; Akira Nakamura; Satoru Kobayashi; Shigeyuki Yokoyama
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

Review 4.  P bodies: at the crossroads of post-transcriptional pathways.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Elisa Izaurralde
Journal:  Nat Rev Mol Cell Biol       Date:  2007-01       Impact factor: 94.444

5.  Use of cleaved amplified polymorphic sequences (CAPS) as genetic markers in Arabidopsis thaliana.

Authors:  J Glazebrook; E Drenkard; D Preuss; F M Ausubel
Journal:  Methods Mol Biol       Date:  1998

6.  A protein component of Drosophila polar granules is encoded by vasa and has extensive sequence similarity to ATP-dependent helicases.

Authors:  B Hay; L Y Jan; Y N Jan
Journal:  Cell       Date:  1988-11-18       Impact factor: 41.582

7.  The translational regulator CPEB1 provides a link between dcp1 bodies and stress granules.

Authors:  A Wilczynska; C Aigueperse; M Kress; F Dautry; D Weil
Journal:  J Cell Sci       Date:  2005-03-01       Impact factor: 5.285

8.  In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA.

Authors:  Eneida Abreu Parizotto; Patrice Dunoyer; Nadia Rahm; Christophe Himber; Olivier Voinnet
Journal:  Genes Dev       Date:  2004-09-01       Impact factor: 11.361

9.  SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis.

Authors:  Angela Peragine; Manabu Yoshikawa; Gang Wu; Heidi L Albrecht; R Scott Poethig
Journal:  Genes Dev       Date:  2004-10-01       Impact factor: 11.361

Review 10.  Cell-to-cell transport of proteins and fluorescent tracers via plasmodesmata during plant development.

Authors:  Patricia Zambryski
Journal:  J Cell Biol       Date:  2004-01-19       Impact factor: 10.539

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  50 in total

1.  A plasmodesmata-localized protein mediates crosstalk between cell-to-cell communication and innate immunity in Arabidopsis.

Authors:  Jung-Youn Lee; Xu Wang; Weier Cui; Ross Sager; Shannon Modla; Kirk Czymmek; Boris Zybaliov; Klaas van Wijk; Chong Zhang; Hua Lu; Venkatachalam Lakshmanan
Journal:  Plant Cell       Date:  2011-09-20       Impact factor: 11.277

Review 2.  Opportunities and successes in the search for plasmodesmal proteins.

Authors:  Christine Faulkner; Andy Maule
Journal:  Protoplasma       Date:  2010-10-05       Impact factor: 3.356

Review 3.  Processing bodies and plant development.

Authors:  Jun Xu; Nam-Hai Chua
Journal:  Curr Opin Plant Biol       Date:  2010-11-11       Impact factor: 7.834

4.  Peeking into pit fields: a multiple twinning model of secondary plasmodesmata formation in tobacco.

Authors:  Christine Faulkner; Ozgur E Akman; Karen Bell; Chris Jeffree; Karl Oparka
Journal:  Plant Cell       Date:  2008-06-30       Impact factor: 11.277

5.  Plasmodesmata transport of GFP alone or fused to potato virus X TGBp1 is diffusion driven.

Authors:  G Schönknecht; J E Brown; J Verchot-Lubicz
Journal:  Protoplasma       Date:  2008       Impact factor: 3.356

Review 6.  To gate, or not to gate: regulatory mechanisms for intercellular protein transport and virus movement in plants.

Authors:  Shoko Ueki; Vitaly Citovsky
Journal:  Mol Plant       Date:  2011-07-10       Impact factor: 13.164

7.  Tandem high-pressure freezing and quick freeze substitution of plant tissues for transmission electron microscopy.

Authors:  Krzysztof Bobik; John R Dunlap; Tessa M Burch-Smith
Journal:  J Vis Exp       Date:  2014-10-13       Impact factor: 1.355

8.  Chlorophyllide-a-Oxygenase (CAO) deficiency affects the levels of singlet oxygen and formation of plasmodesmata in leaves and shoot apical meristems of barley.

Authors:  Valeria A Dmitrieva; Alexandra N Ivanova; Elena V Tyutereva; Anastasiia I Evkaikina; Ekaterina A Klimova; Olga V Voitsekhovskaja
Journal:  Plant Signal Behav       Date:  2017-04-03

9.  Control of Arabidopsis meristem development by thioredoxin-dependent regulation of intercellular transport.

Authors:  Yoselin Benitez-Alfonso; Michelle Cilia; Adrianna San Roman; Carole Thomas; Andy Maule; Stephen Hearn; David Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-13       Impact factor: 11.205

10.  Indispensable Roles of Plastids in Arabidopsis thaliana Embryogenesis.

Authors:  Shih-Chi Hsu; Mark F Belmonte; John J Harada; Kentaro Inoue
Journal:  Curr Genomics       Date:  2010-08       Impact factor: 2.236

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