| Literature DB >> 17598881 |
Victor J Del Rio Vilas1, Petter Hopp, Telmo Nunes, Giuseppe Ru, Kumar Sivam, Angel Ortiz-Pelaez.
Abstract
BACKGROUND: Two annual surveys, the abattoir and the fallen stock, monitor the presence of scrapie across Europe. A simple comparison between the prevalence estimates in different countries reveals that, in 2003, the abattoir survey appears to detect more scrapie in some countries. This is contrary to evidence suggesting the greater ability of the fallen stock survey to detect the disease. We applied meta-analysis techniques to study this apparent heterogeneity in the behaviour of the surveys across Europe. Furthermore, we conducted a meta-regression analysis to assess the effect of country-specific characteristics on the variability. We have chosen the odds ratios between the two surveys to inform the underlying relationship between them and to allow comparisons between the countries under the meta-regression framework. Baseline risks, those of the slaughtered populations across Europe, and country-specific covariates, available from the European Commission Report, were inputted in the model to explain the heterogeneity.Entities:
Mesh:
Year: 2007 PMID: 17598881 PMCID: PMC1924846 DOI: 10.1186/1746-6148-3-13
Source DB: PubMed Journal: BMC Vet Res ISSN: 1746-6148 Impact factor: 2.741
Figure 1Forest plot. Forest plot of the odds ratios (FS/AS) assuming random effects. Only 14 countries after removal of those with zero counts in both surveys. The solid vertical line is showing an odds-ratio of 1 (no effect). The contribution of each country (weights) to the meta-analysis is represented by the area of the box in the plot. The diamond at the bottom shows the overall treatment effect. Weights are derived from the Mantel-Haenszel method.
Figure 2Galbraith plot. Galbraith plot. The log-odds ratios (b) divided by their standard errors of the 14 countries (after excluding those countries with zero counts in both surveys) are plotted against the reciprocal of the standard errors (horizontal axis). Solid lines represent the unweighted regression line constrained at 0 with a slope equal to the overall logOR of a fixed effects meta-analysis on our data, and its 95% confidence intervals. The position of the countries in the y-axis indicates their contribution to the Q statistic for heterogeneity. The position of the countries on the x-axis indicates the weight of each country in the meta-analysis.
Survey data by country
| Belgium | 0 | 2376 | 2 | 494 | 3.18 | 2.40 | 146 | 0.34 | 1.63 | 1 |
| Denmark | 0 | 871 | 0 | 1320 | N/A | N/A | 105 | 1.26 | 0.83 | 0.13 |
| Germany | 9 | 20107 | 13 | 48616 | -0.52 | 0.19 | 2637 | 1.84 | 0.76 | 0.91 |
| Greece | 49 | 22564 | 13 | 780 | 2.04 | 0.10 | 9042 | 0.01 | 0.25 | 0.43 |
| Spain | 19 | 49921 | 8 | 12942 | 0.48 | 0.18 | 23045 | 0.06 | 0.22 | - |
| France | 46 | 44641 | 34 | 18955 | 0.55 | 0.05 | 8962 | 0.21 | 0.50 | 0.49 |
| Ireland | 9 | 51579 | 18 | 2830 | 3.60 | 0.17 | 5907 | 0.05 | 0.87 | 1 |
| Italy | 14 | 35260 | 13 | 5011 | 1.88 | 0.15 | 7952 | 0.06 | 0.44 | 0.12 |
| Luxembourg | 0 | 213 | 0 | 244 | N/A | N/A | 7 | 3.49 | 3.04 | 1 |
| Netherlands | 45 | 21095 | 6 | 3994 | -0.35 | 0.19 | 1276 | 0.31 | 1.66 | 0 |
| Austria | 0 | 4225 | 0 | 3255 | N/A | N/A | 304 | 1.07 | 1.39 | 0 |
| Portugal | 6 | 10697 | 0 | 243 | 1.22 | 2.16 | 3411 | 0.01 | 0.31 | 1 |
| Finland | 0 | 1990 | 0 | 683 | N/A | N/A | 67 | 1.02 | 2.97 | 0.71 |
| Sweden | 2 | 5175 | 0 | 2849 | -1.01 | 2.40 | 451 | 0.63 | 1.15 | 1 |
| UK | 45 | 72473 | 13 | 5113 | 1.41 | 0.10 | 24574 | 0.02 | 0.30 | 0.89 |
| Chzech Rep | 1 | 425 | 0 | 2528 | -2.88 | 2.67 | 103 | 2.45 | 0.41 | - |
| Slovakia | 1 | 3923 | 1 | 213 | 2.91 | 2.00 | 325 | 0.07 | 1.21 | - |
| Norway | 5 | 33519 | 8 | 3359 | 2.77 | 0.33 | 928 | 0.36 | 3.61 | 1 |
rshows the number of positive samples from the fallen stock, rshows the number of positive samples from the abattoir survey, nshows the number of samples tested in the fallen stock and nthe number of samples tested in the abattoir survey. LogOR (log (odds fallen stock/odds abattoir survey)), variance of the logOR (calculated as 1/r+ 1/n+ 1/r+ 1/n) with 0.5 continuity correction added to all denominators for those countries with one 0 in any of the columns (r, r, n, n), adult sheep population by country and country-specific covariates inputted into the meta-regression model: "repreFS" (proportion of the adult sheep population sampled by the FS), "repreAS" (proportion of the adult sheep population sampled by the AS) and "test" (proportion of ELISA tests over all samples tested). N/A under the logOR and variance headings show those countries with zero counts in both surveys.