Literature DB >> 17592848

Selective detection and quantification of oxidized abasic lesions in DNA.

Shanta Dhar1, Tetsuya Kodama, Marc M Greenberg.   

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Year:  2007        PMID： 17592848      PMCID： PMC1986706          DOI： 10.1021/ja073014e

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN： 0002-7863            Impact factor:   15.419


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  17 in total

1.  The 2-deoxyribonolactone lesion produced in DNA by neocarzinostatin and other damaging agents forms cross-links with the base-excision repair enzyme endonuclease III.

Authors:  M Hashimoto; M M Greenberg; Y W Kow; J T Hwang; R P Cunningham
Journal:  J Am Chem Soc       Date:  2001-04-04       Impact factor: 15.419

2.  Synthesis and characterization of oligonucleotides containing the c4'-oxidized abasic site produced by bleomycin and other DNA damaging agents.

Authors:  Jaeseung Kim; Jun Mo Gil; Marc M Greenberg
Journal:  Angew Chem Int Ed Engl       Date:  2003       Impact factor: 15.336

3.  Mutagenic effects of 2-deoxyribonolactone in Escherichia coli. An abasic lesion that disobeys the A-rule.

Authors:  Kelly M Kroeger; Yu Lin Jiang; Yoke Wah Kow; Myron F Goodman; Marc M Greenberg
Journal:  Biochemistry       Date:  2004-06-01       Impact factor: 3.162

4.  In vitro effects of a C4'-oxidized abasic site on DNA polymerases.

Authors:  Marc M Greenberg; Yvonne N Weledji; Kelly M Kroeger; Jaeseung Kim; Myron F Goodman
Journal:  Biochemistry       Date:  2004-03-09       Impact factor: 3.162

5.  2-Deoxyribonolactone lesions in X-ray-irradiated DNA: quantitative determination by catalytic 5-methylene-2-furanone release.

Authors:  Marina Roginskaya; Yuriy Razskazovskiy; William A Bernhard
Journal:  Angew Chem Int Ed Engl       Date:  2005-09-26       Impact factor: 15.336

6.  Effects of the C4'-oxidized abasic site on replication in Escherichia coli. An unusually large deletion is induced by a small lesion.

Authors:  Kelly M Kroeger; Jaeseung Kim; Myron F Goodman; Marc M Greenberg
Journal:  Biochemistry       Date:  2004-11-02       Impact factor: 3.162

7.  Detection of DNA adducts derived from the reactive metabolite of furan, cis-2-butene-1,4-dial.

Authors:  Michael C Byrns; Choua C Vu; Jonathan W Neidigh; José-Luis Abad; Roger A Jones; Lisa A Peterson
Journal:  Chem Res Toxicol       Date:  2006-03       Impact factor: 3.739

Review 8.  Free radical-induced damage to DNA: mechanisms and measurement.

Authors:  Miral Dizdaroglu; Pawel Jaruga; Mustafa Birincioglu; Henry Rodriguez
Journal:  Free Radic Biol Med       Date:  2002-06-01       Impact factor: 7.376

9.  DNA strand breaking by the hydroxyl radical is governed by the accessible surface areas of the hydrogen atoms of the DNA backbone.

Authors:  B Balasubramanian; W K Pogozelski; T D Tullius
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

10.  5'-(2-phosphoryl-1,4-dioxobutane) as a product of 5'-oxidation of deoxyribose in DNA: elimination as trans-1,4-dioxo-2-butene and approaches to analysis.

Authors:  Bingzi Chen; Tonika Bohnert; Xinfeng Zhou; Peter C Dedon
Journal:  Chem Res Toxicol       Date:  2004-11       Impact factor: 3.739
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  15 in total

1.  An Oxidized Abasic Lesion as an Intramolecular Source of DNA Adducts.

Authors:  Lirui Guan; Marc M Greenberg
Journal:  Aust J Chem       Date:  2011-04-18       Impact factor: 1.321

2.  Synthesis and analysis of oligonucleotides containing abasic site analogues.

Authors:  Haidong Huang; Marc M Greenberg
Journal:  J Org Chem       Date:  2008-03-07       Impact factor: 4.354

3.  Tandem mass spectrometry-based detection of c4'-oxidized abasic sites at specific positions in DNA fragments.

Authors:  Goutam Chowdhury; F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2009-07       Impact factor: 3.739

4.  Scope and mechanism of interstrand cross-link formation by the C4'-oxidized abasic site.

Authors:  Jonathan T Sczepanski; Aaron C Jacobs; Ananya Majumdar; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

Review 5.  Investigating the biochemical impact of DNA damage with structure-based probes: abasic sites, photodimers, alkylation adducts, and oxidative lesions.

Authors:  Heidi A Dahlmann; V G Vaidyanathan; Shana J Sturla
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

6.  Reactivity of Nucleic Acid Radicals.

Authors:  Marc M Greenberg
Journal:  Adv Phys Org Chem       Date:  2016       Impact factor: 2.833

7.  Long patch base excision repair compensates for DNA polymerase β inactivation by the C4'-oxidized abasic site.

Authors:  Aaron C Jacobs; Cortney R Kreller; Marc M Greenberg
Journal:  Biochemistry       Date:  2010-12-14       Impact factor: 3.162

8.  Templated chemistry for monitoring damage and repair directly in duplex DNA.

Authors:  Seoung Ho Lee; Shenliang Wang; Eric T Kool
Journal:  Chem Commun (Camb)       Date:  2012-07-10       Impact factor: 6.222

9.  Sensitivity of Ru(bpy)2dppz2+ luminescence to DNA defects.

Authors:  Mi Hee Lim; Hang Song; Eric D Olmon; Elizabeth E Dervan; Jacqueline K Barton
Journal:  Inorg Chem       Date:  2009-06-15       Impact factor: 5.165

10.  DNA interstrand cross-link formation by the 1,4-dioxobutane abasic lesion.

Authors:  Lirui Guan; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2009-10-28       Impact factor: 15.419
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