Literature DB >> 17579813

Du1, encoding a novel Prp1 protein, regulates starch biosynthesis through affecting the splicing of Wxb pre-mRNAs in rice (Oryza sativa L.).

Dali Zeng1, Meixian Yan, Yonghong Wang, Xinfang Liu, Qian Qian, Jiayang Li.   

Abstract

Starch is the major component of cereal grains. In rice, starch properties determine the eating and cooking quality. The dull endosperm of rice grains is a classical morphological and agronomical trait that has long been exploited for breeding and genetics study. To understand the molecular mechanism that regulates the starch biosynthesis in rice grains, we characterized a classic rice mutant dull endosperm1 (du1) and isolated Du1 through a map-based cloning approach. Du1, encoding a member of pre-mRNA processing (Prp1) family, is expressed mainly in panicles. Du1 specifically affects the splicing efficiency of Wx(b) and regulates starch biosynthesis by mediating the expression of starch biosynthesis genes. Analysis of du1wx shows that Du1 acts upstream of Wx(b). These results strongly suggest that Du1 may function as a regulator of the starch biosynthesis by affecting the splicing of Wx(b) and the expression of other genes involved in the rice starch biosynthetic pathways.

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Year:  2007        PMID: 17579813     DOI: 10.1007/s11103-007-9186-3

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  33 in total

1.  Analysis of genotypic and environmental effects on rice starch. 1. Apparent amylose content, pasting viscosity, and gel texture.

Authors:  Jinsong Bao; Xiangli Kong; Jiankun Xie; Linjuan Xu
Journal:  J Agric Food Chem       Date:  2004-09-22       Impact factor: 5.279

2.  Aberrant splicing of intron 1 leads to the heterogeneous 5' UTR and decreased expression of waxy gene in rice cultivars of intermediate amylose content.

Authors:  X L Cai; Z Y Wang; Y Y Xing; J L Zhang; M M Hong
Journal:  Plant J       Date:  1998-05       Impact factor: 6.417

3.  Comparison of Waxy gene regulation in the endosperm and pollen in Oryza sativa L.

Authors:  H Y Hirano; Y Sano
Journal:  Genes Genet Syst       Date:  2000-10       Impact factor: 1.517

4.  The amylose content in rice endosperm is related to the post-transcriptional regulation of the waxy gene.

Authors:  Z Y Wang; F Q Zheng; G Z Shen; J P Gao; D P Snustad; M G Li; J L Zhang; M M Hong
Journal:  Plant J       Date:  1995-04       Impact factor: 6.417

5.  Analysis of the genetic behavior of some starch properties in indica rice ( Oryza sativa L.): thermal properties, gel texture, swelling volume.

Authors:  J. S. Bao; M. Sun; H. Corke
Journal:  Theor Appl Genet       Date:  2002-02       Impact factor: 5.699

6.  Antisense waxy genes with highly active promoters effectively suppress waxy gene expression in transgenic rice.

Authors:  R Terada; M Nakajima; M Isshiki; R J Okagaki; S R Wessler; K Shimamoto
Journal:  Plant Cell Physiol       Date:  2000-07       Impact factor: 4.927

7.  The starch-debranching enzymes isoamylase and pullulanase are both involved in amylopectin biosynthesis in rice endosperm

Authors: 
Journal:  Plant Physiol       Date:  1999-10       Impact factor: 8.340

8.  A single base change altered the regulation of the Waxy gene at the posttranscriptional level during the domestication of rice.

Authors:  H Y Hirano; M Eiguchi; Y Sano
Journal:  Mol Biol Evol       Date:  1998-08       Impact factor: 16.240

9.  Commitment of yeast pre-mRNA to the splicing pathway requires a novel U1 small nuclear ribonucleoprotein polypeptide, Prp39p.

Authors:  S R Lockhart; B C Rymond
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

Review 10.  Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: rice endosperm as a model tissue.

Authors:  Yasunori Nakamura
Journal:  Plant Cell Physiol       Date:  2002-07       Impact factor: 4.927

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  22 in total

1.  Genetic analysis and molecular mapping of low amylose gene du12(t) in rice (Oryza sativa L.).

Authors:  Gilang Kiswara; Jong-Hee Lee; Yeon-Jae Hur; Jun-Hyeon Cho; Ji-Yoon Lee; Sang-Yeol Kim; Yeong-Bo Sohn; You-Chun Song; Min-Hee Nam; Byung-Wook Yun; Kyung-Min Kim
Journal:  Theor Appl Genet       Date:  2013-10-10       Impact factor: 5.699

2.  Characterization of barley Prp1 gene and its expression during seed development and under abiotic stress.

Authors:  Qian-Tao Jiang; Tao Liu; Jian Ma; Yu-Ming Wei; Zhen-Xiang Lu; Xiu-Jin Lan; Shou-Fen Dai; You-Liang Zheng
Journal:  Genetica       Date:  2011-10       Impact factor: 1.082

3.  Map-based cloning proves qGC-6, a major QTL for gel consistency of japonica/indica cross, responds by Waxy in rice (Oryza sativa L.).

Authors:  Yan Su; Yuchun Rao; Shikai Hu; Yaolong Yang; Zhenyu Gao; Guanghen Zhang; Jian Liu; Jiang Hu; Meixian Yan; Guojun Dong; Li Zhu; Longbiao Guo; Qian Qian; Dali Zeng
Journal:  Theor Appl Genet       Date:  2011-06-22       Impact factor: 5.699

4.  Mutation of TL1, encoding a novel C2H2 zinc finger protein, improves grains eating and cooking quality in rice.

Authors:  Guochao Zhao; Shuifeng Xie; Shipeng Zong; Tong Wang; Chanjuan Mao; Jianxin Shi; Jianyue Li
Journal:  Theor Appl Genet       Date:  2022-08-22       Impact factor: 5.574

Review 5.  Post-genomics revolution in the design of premium quality rice in a high-yielding background to meet consumer demands in the 21st century.

Authors:  Nese Sreenivasulu; Changquan Zhang; Rhowell N Tiozon; Qiaoquan Liu
Journal:  Plant Commun       Date:  2021-12-28

Review 6.  Resistant starch formation in rice: Genetic regulation and beyond.

Authors:  Lisha Shen; Jiayang Li; Yunhai Li
Journal:  Plant Commun       Date:  2022-04-20

7.  Du13 encodes a C2 H2 zinc-finger protein that regulates Wxb pre-mRNA splicing and microRNA biogenesis in rice endosperm.

Authors:  Yue Cai; Wenwei Zhang; Yushuang Fu; Zhuangzhuang Shan; Jiahuan Xu; Peng Wang; Fei Kong; Jie Jin; Haigang Yan; Xinyuan Ge; Yongxiang Wang; Xiaoman You; Jie Chen; Xin Li; Weiwei Chen; Xingang Chen; Jing Ma; Xiaojie Tang; Jie Zhang; Yiqun Bao; Ling Jiang; Haiyang Wang; Jianmin Wan
Journal:  Plant Biotechnol J       Date:  2022-05-13       Impact factor: 13.263

8.  qAC2, a novel QTL that interacts with Wx and controls the low amylose content in rice (Oryza sativa L.).

Authors:  Yoko Takemoto-Kuno; Hiroki Mitsueda; Keitaro Suzuki; Hideyuki Hirabayashi; Osamu Ideta; Noriaki Aoki; Takayuki Umemoto; Takuro Ishii; Ikuo Ando; Hiroshi Kato; Hiroshi Nemoto; Tokio Imbe; Yoshinobu Takeuchi
Journal:  Theor Appl Genet       Date:  2015-03-12       Impact factor: 5.699

9.  Identification and characterization of a novel Waxy allele from a Yunnan rice landrace.

Authors:  Linglong Liu; Xiaodong Ma; Shijia Liu; Changlan Zhu; Ling Jiang; Yihua Wang; Yi Shen; Yulong Ren; Hui Dong; Liangming Chen; Xi Liu; Zhigang Zhao; Huqu Zhai; Jianmin Wan
Journal:  Plant Mol Biol       Date:  2009-09-17       Impact factor: 4.076

10.  OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm.

Authors:  Jie-Chen Wang; Heng Xu; Ying Zhu; Qiao-Quan Liu; Xiu-Ling Cai
Journal:  J Exp Bot       Date:  2013-07-11       Impact factor: 6.992

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