Literature DB >> 17578677

Amino acid interaction with and adsorption on clays: FT-IR and Mössbauer spectroscopy and X-ray diffractometry investigations.

Luís O B Benetoli1, Cláudio M D de Souza, Klébson L da Silva, Ivan G de Souza, Henrique de Santana, Andrea Paesano, Antonio C S da Costa, Cássia Thaïs B V Zaia, Dimas A M Zaia.   

Abstract

In the present paper, the adsorption of amino acids (Ala, Met, Gln, Cys, Asp, Lys, His) on clays (bentonite, kaolinite) was studied at different pH (3.00, 6.00, 8.00). The amino acids were dissolved in seawater, which contains the major elements. There were two main findings in this study. First, amino acids with a charged R group (Asp, Lys, His) and Cys were adsorbed on clays more than Ala, Met and Gln (uncharged R groups). However, 74% of the amino acids in the proteins of modern organisms have uncharged R groups. These results raise some questions about the role of minerals in providing a prebiotic concentration mechanism for amino acids. Several mechanisms are also discussed that could produce peptide with a greater proportion of amino acids with uncharged R groups. Second, Cys could play an important role in prebiotic chemistry besides participating in the structure of peptides/proteins. The FT-IR spectra showed that the adsorption of amino acids on the clays occurs through the amine group. However, the Cys/clay interaction occurs through the sulfhydryl and amine groups. X-ray diffractometry showed that pH affects the bentonite interlayer, and at pH 3.00 the expansion of Cys/bentonite was greater than that of the samples of ethylene glycol/bentonite saturated with Mg. The Mössbauer spectrum for the sample with absorbed Cys showed a large increase ( approximately 20%) in ferrous ions. This means that Cys was able to partially reduce iron present in bentonite. This result is similar to that which occurs with aconitase where the ferric ions are reduced to Fe 2.5.

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Year:  2007        PMID: 17578677     DOI: 10.1007/s11084-007-9072-7

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  35 in total

1.  The stability of some selected amino acids under attempted redox constrained hydrothermal conditions.

Authors:  E Andersson; N G Holm
Journal:  Orig Life Evol Biosph       Date:  2000-02       Impact factor: 1.950

2.  Primordial coding of amino acids by adsorbed purine bases.

Authors:  Stephen J Sowerby; George B Petersen; Nils G Holm
Journal:  Orig Life Evol Biosph       Date:  2002-02       Impact factor: 1.950

3.  Lipid synthesis under hydrothermal conditions by Fischer-Tropsch-type reactions.

Authors:  T M McCollom; G Ritter; B R Simoneit
Journal:  Orig Life Evol Biosph       Date:  1999-03       Impact factor: 1.950

4.  Amplification of diverse catalytic properties of evolving molecules in a simulated hydrothermal environment.

Authors:  Shinnosuke Yokoyama; Akihiro Koyama; Atsushi Nemoto; Hajime Honda; Ei-ichi Imai; Kuniyuki Hatori; Koichiro Matsuno
Journal:  Orig Life Evol Biosph       Date:  2003-12       Impact factor: 1.950

5.  A MODIFIED NINHYDRIN COLORIMETRIC METHOD FOR THE DETERMINATION OF PLASMA ALPHA-AMINO NITROGEN.

Authors:  L J FISHER; S L BUNTING; L E ROSENBERG
Journal:  Clin Chem       Date:  1963-10       Impact factor: 8.327

6.  Adsorption and thermal condensation mechanisms of amino acids on oxide supports. 1. Glycine on silica.

Authors:  Ming Meng; Lorenzo Stievano; Jean-François Lambert
Journal:  Langmuir       Date:  2004-02-03       Impact factor: 3.882

7.  Synthesizing oligomers from monomeric nucleotides in simulated hydrothermal environments.

Authors:  H Ogasawara; A Yoshida; E Imai; H Honda; K Hatori; K Matsuno
Journal:  Orig Life Evol Biosph       Date:  2000-12       Impact factor: 1.950

8.  Activated alumina as an energy source for peptide bond formation: consequences for mineral-mediated prebiotic processes.

Authors:  J Bujdák; B M Rode
Journal:  Amino Acids       Date:  2001       Impact factor: 3.520

9.  Glycine and diglycine as possible catalytic factors in the prebiotic evolution of peptides.

Authors:  Kristof Plankensteiner; Alessandro Righi; Bernd M Rode
Journal:  Orig Life Evol Biosph       Date:  2002-06       Impact factor: 1.950

10.  Acyl silicates and acyl aluminates as activated intermediates in peptide formation on clays.

Authors:  D H White; R M Kennedy; J Macklin
Journal:  Orig Life       Date:  1984
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  13 in total

Review 1.  Mineral surfaces, geochemical complexities, and the origins of life.

Authors:  Robert M Hazen; Dimitri A Sverjensky
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04-14       Impact factor: 10.005

Review 2.  Adsorption and polymerization of amino acids on mineral surfaces: a review.

Authors:  Jean-François Lambert
Journal:  Orig Life Evol Biosph       Date:  2008-03-15       Impact factor: 1.950

3.  Exfoliation and intercalation of montmorillonite by small peptides.

Authors:  Karin A Block; Adrianna Trusiak; Al Katz; Alexandra Alimova; Hui Wei; Paul Gottlieb; Jeffrey C Steiner
Journal:  Appl Clay Sci       Date:  2015-04       Impact factor: 5.467

4.  Hypothesis of Lithocoding: Origin of the Genetic Code as a "Double Jigsaw Puzzle" of Nucleobase-Containing Molecules and Amino Acids Assembled by Sequential Filling of Apatite Mineral Cellules.

Authors:  Nikolai E Skoblikow; Andrei A Zimin
Journal:  J Mol Evol       Date:  2016-04-05       Impact factor: 2.395

5.  A Prebiotic Chemistry Experiment on the Adsorption of Nucleic Acids Bases onto a Natural Zeolite.

Authors:  Pedro R Anizelli; João Paulo T Baú; Frederico P Gomes; Antonio Carlos S da Costa; Cristine E A Carneiro; Cássia Thaïs B V Zaia; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2015-03-10       Impact factor: 1.950

6.  Adsorption of adenine, cytosine, thymine, and uracil on sulfide-modified montmorillonite: FT-IR, Mössbauer and EPR spectroscopy and X-ray diffractometry studies.

Authors:  Cristine E A Carneiro; Graciele Berndt; Ivan G de Souza Junior; Cláudio M D de Souza; Andrea Paesano; Antonio C S da Costa; Eduardo di Mauro; Henrique de Santana; Cássia T B V Zaia; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2011-06-30       Impact factor: 1.950

7.  Salinity Effects on the Adsorption of Nucleic Acid Compounds on Na-Montmorillonite: a Prebiotic Chemistry Experiment.

Authors:  Saúl A Villafañe-Barajas; João Paulo T Baú; María Colín-García; Alicia Negrón-Mendoza; Alejandro Heredia-Barbero; Teresa Pi-Puig; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2018-02-01       Impact factor: 1.950

8.  Peptide formation mechanism on montmorillonite under thermal conditions.

Authors:  Shigeshi Fuchida; Harue Masuda; Keiji Shinoda
Journal:  Orig Life Evol Biosph       Date:  2014-06-11       Impact factor: 1.950

9.  Formation of Diastereoisomeric Piperazine-2,5-dione from DL-Alanine in the Presence of Olivine and Water.

Authors:  Shigeshi Fuchida; Hiroshi Naraoka; Harue Masuda
Journal:  Orig Life Evol Biosph       Date:  2016-04-12       Impact factor: 1.950

10.  Role of the Interchangeable Cations on the Sorption of Fumaric and Succinic Acids on Montmorillonite and its Relevance in Prebiotic Chemistry.

Authors:  A Meléndez-López; M Colín-García; F Ortega-Gutiérrez; J Cruz-Castañeda
Journal:  Orig Life Evol Biosph       Date:  2021-07-12       Impact factor: 1.120

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