Literature DB >> 17572691

RNA regulons: coordination of post-transcriptional events.

Jack D Keene1.   

Abstract

Recent findings demonstrate that multiple mRNAs are co-regulated by one or more sequence-specific RNA-binding proteins that orchestrate their splicing, export, stability, localization and translation. These and other observations have given rise to a model in which mRNAs that encode functionally related proteins are coordinately regulated during cell growth and differentiation as post-transcriptional RNA operons or regulons, through a ribonucleoprotein-driven mechanism. Here I describe several recently discovered examples of RNA operons in budding yeast, fruitfly and mammalian cells, and their potential importance in processes such as immune response, oxidative metabolism, stress response, circadian rhythms and disease. I close by considering the evolutionary wiring and rewiring of these combinatorial post-transcriptional gene-expression networks.

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Year:  2007        PMID: 17572691     DOI: 10.1038/nrg2111

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  660 in total

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2.  Expression of 3β-HSD1 and P450 Aromatase enzymes during mouse gonad differentiation.

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Review 4.  Posttranscriptional regulation of cancer traits by HuR.

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Journal:  Wiley Interdiscip Rev RNA       Date:  2010-05-06       Impact factor: 9.957

5.  Incrimination of heterogeneous nuclear ribonucleoprotein E1 (hnRNP-E1) as a candidate sensor of physiological folate deficiency.

Authors:  Ying-Sheng Tang; Rehana A Khan; Yonghua Zhang; Suhong Xiao; Mu Wang; Deborah K Hansen; Hiremagalur N Jayaram; Aśok C Antony
Journal:  J Biol Chem       Date:  2011-09-19       Impact factor: 5.157

6.  HuR function and translational state analysis following global brain ischemia and reperfusion.

Authors:  Jeffrey J Szymanski; Haihui Wang; Jill T Jamison; Donald J DeGracia
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7.  PAR-CLIP (Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation): a step-by-step protocol to the transcriptome-wide identification of binding sites of RNA-binding proteins.

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Journal:  Methods Enzymol       Date:  2014       Impact factor: 1.600

Review 8.  Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Authors:  Nahum Sonenberg; Alan G Hinnebusch
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

9.  A Novel Method to Quantify RNA-Protein Interactions In Situ Using FMTRIP and Proximity Ligation.

Authors:  C Zurla; J Jung; E L Blanchard; P J Santangelo
Journal:  Methods Mol Biol       Date:  2017

10.  Viral manipulation of host mRNA decay.

Authors:  Liang Guo; Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  Future Virol       Date:  2018-02-23       Impact factor: 1.831

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