Literature DB >> 17563388

Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster.

Anastasios C Koutsos1, Claudia Blass, Stephan Meister, Sabine Schmidt, Robert M MacCallum, Marcelo B Soares, Frank H Collins, Vladimir Benes, Evgeny Zdobnov, Fotis C Kafatos, George K Christophides.   

Abstract

The African mosquito Anopheles gambiae is the major vector of human malaria. We report a genome-wide survey of mosquito gene expression profiles clustered temporally into developmental programs and spatially into adult tissue-specific patterns. Global expression analysis shows that genes that belong to related functional categories or that encode the same or functionally linked protein domains are associated with characteristic developmental programs or tissue patterns. Comparative analysis of our data together with data published from Drosophila melanogaster reveal an overall strong and positive correlation of developmental expression between orthologous genes. The degree of correlation varies, depending on association of orthologs with certain developmental programs or functional groups. Interestingly, the similarity of gene expression is not correlated with the coding sequence similarity of orthologs, indicating that expression profiles and coding sequences evolve independently. In addition to providing a comprehensive view of temporal and spatial gene expression during the A. gambiae life cycle, this large-scale comparative transcriptomic analysis has detected important evolutionary features of insect transcriptomes.

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Year:  2007        PMID: 17563388      PMCID: PMC2040894          DOI: 10.1073/pnas.0703988104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Comparing genomic expression patterns across species identifies shared transcriptional profile in aging.

Authors:  Steven A McCarroll; Coleen T Murphy; Sige Zou; Scott D Pletcher; Chen-Shan Chin; Yuh Nung Jan; Cynthia Kenyon; Cornelia I Bargmann; Hao Li
Journal:  Nat Genet       Date:  2004-01-18       Impact factor: 38.330

2.  Evaluation of gene expression measurements from commercial microarray platforms.

Authors:  Paul K Tan; Thomas J Downey; Edward L Spitznagel; Pin Xu; Dadin Fu; Dimiter S Dimitrov; Richard A Lempicki; Bruce M Raaka; Margaret C Cam
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

3.  A microarray analysis of the rice transcriptome and its comparison to Arabidopsis.

Authors:  Ligeng Ma; Chen Chen; Xigang Liu; Yuling Jiao; Ning Su; Lin Li; Xiangfeng Wang; Mengliang Cao; Ning Sun; Xiuqing Zhang; Jingyue Bao; Jian Li; Soren Pedersen; Lars Bolund; Hongyu Zhao; Longping Yuan; Gane Ka-Shu Wong; Jun Wang; Xing Wang Deng; Jian Wang
Journal:  Genome Res       Date:  2005-09       Impact factor: 9.043

4.  Analysis of orthologous gene expression between human pulmonary adenocarcinoma and a carcinogen-induced murine model.

Authors:  Robert S Stearman; Lori Dwyer-Nield; Laura Zerbe; Stacy A Blaine; Zeng Chan; Paul A Bunn; Gary L Johnson; Fred R Hirsch; Daniel T Merrick; Wilbur A Franklin; Anna E Baron; Robert L Keith; Raphael A Nemenoff; Alvin M Malkinson; Mark W Geraci
Journal:  Am J Pathol       Date:  2005-12       Impact factor: 4.307

5.  Analysis of matched mRNA measurements from two different microarray technologies.

Authors:  Winston Patrick Kuo; Tor-Kristian Jenssen; Atul J Butte; Lucila Ohno-Machado; Isaac S Kohane
Journal:  Bioinformatics       Date:  2002-03       Impact factor: 6.937

6.  Deubiquitination of histone H2B by a yeast acetyltransferase complex regulates transcription.

Authors:  Jeremy A Daniel; Michael S Torok; Zu-Wen Sun; David Schieltz; C David Allis; John R Yates; Patrick A Grant
Journal:  J Biol Chem       Date:  2003-12-03       Impact factor: 5.157

7.  Genome expression analysis of Anopheles gambiae: responses to injury, bacterial challenge, and malaria infection.

Authors:  George Dimopoulos; George K Christophides; Stephan Meister; Jörg Schultz; Kevin P White; Carolina Barillas-Mury; Fotis C Kafatos
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-19       Impact factor: 11.205

8.  Anopheles albitarsis embryogenesis: morphological identification of major events.

Authors:  Adelaide Tardin Monnerat; Marcelo Pelajo Machado; Bruno Silva Vale; Maurilio José Soares; José Bento Pereira Lima; Henrique Leonel Lenzi; Denise Valle
Journal:  Mem Inst Oswaldo Cruz       Date:  2002-06       Impact factor: 2.743

9.  Conservation and divergence of light-regulated genome expression patterns during seedling development in rice and Arabidopsis.

Authors:  Yuling Jiao; Ligeng Ma; Elizabeth Strickland; Xing Wang Deng
Journal:  Plant Cell       Date:  2005-11-11       Impact factor: 11.277

10.  Gene expression during the life cycle of Drosophila melanogaster.

Authors:  Michelle N Arbeitman; Eileen E M Furlong; Farhad Imam; Eric Johnson; Brian H Null; Bruce S Baker; Mark A Krasnow; Matthew P Scott; Ronald W Davis; Kevin P White
Journal:  Science       Date:  2002-09-27       Impact factor: 47.728

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  42 in total

1.  Evolutionary analysis of the kinesin light chain genes in the yellow fever mosquito Aedes aegypti: gene duplication as a source for novel early zygotic genes.

Authors:  James K Biedler; Zhijian Tu
Journal:  BMC Evol Biol       Date:  2010-07-08       Impact factor: 3.260

2.  A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns.

Authors:  Tomislav Domazet-Lošo; Diethard Tautz
Journal:  Nature       Date:  2010-12-09       Impact factor: 49.962

3.  The cellular geometry of growth drives the amino acid economy of Caenorhabditis elegans.

Authors:  Jonathan Swire; Silke Fuchs; Jacob G Bundy; Armand M Leroi
Journal:  Proc Biol Sci       Date:  2009-05-13       Impact factor: 5.349

Review 4.  Gene expression studies in mosquitoes.

Authors:  Xiao-Guang Chen; Geetika Mathur; Anthony A James
Journal:  Adv Genet       Date:  2008       Impact factor: 1.944

Review 5.  Developmental plasticity and the evolution of animal complex life cycles.

Authors:  Alessandro Minelli; Giuseppe Fusco
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-02-27       Impact factor: 6.237

6.  Spatial and morphological reorganization of endosymbiosis during metamorphosis accommodates adult metabolic requirements in a weevil.

Authors:  Justin Maire; Nicolas Parisot; Mariana Galvao Ferrarini; Agnès Vallier; Benjamin Gillet; Sandrine Hughes; Séverine Balmand; Carole Vincent-Monégat; Anna Zaidman-Rémy; Abdelaziz Heddi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-28       Impact factor: 11.205

7.  Transcriptome analysis of Anopheles stephensi embryo using expressed sequence tags.

Authors:  Kaustubh Gokhale; Deepak P Patil; Dhiraj P Dhotre; Rajnikant Dixit; Murlidhar J Mendki; Milind S Patole; Yogesh S Shouche
Journal:  J Biosci       Date:  2013-06       Impact factor: 1.826

8.  Gene expression divergence between malaria vector sibling species Anopheles gambiae and An. coluzzii from rural and urban Yaoundé Cameroon.

Authors:  Bryan J Cassone; Colince Kamdem; Changde Cheng; John C Tan; Matthew W Hahn; Carlo Costantini; Nora J Besansky
Journal:  Mol Ecol       Date:  2014-04-11       Impact factor: 6.185

Review 9.  Molecular genetic manipulation of vector mosquitoes.

Authors:  Olle Terenius; Osvaldo Marinotti; Douglas Sieglaff; Anthony A James
Journal:  Cell Host Microbe       Date:  2008-11-13       Impact factor: 21.023

10.  Analysis of expression in the Anopheles gambiae developing testes reveals rapidly evolving lineage-specific genes in mosquitoes.

Authors:  Elzbieta Krzywinska; Jaroslaw Krzywinski
Journal:  BMC Genomics       Date:  2009-07-06       Impact factor: 3.969

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