Literature DB >> 17563349

P-cluster maturation on nitrogenase MoFe protein.

Yilin Hu1, Aaron W Fay, Chi Chung Lee, Markus W Ribbe.   

Abstract

Biosynthesis of nitrogenase P-cluster has attracted considerable attention because it is biologically important and chemically unprecedented. Previous studies suggest that P-cluster is formed from a precursor consisting of paired [4Fe-4S]-like clusters and that P-cluster is assembled stepwise on MoFe protein, i.e., one cluster is assembled before the other. Here, we specifically tackle the assembly of the second P-cluster by combined biochemical and spectroscopic approaches. By using a P-cluster maturation assay that is based on purified components, we show that the maturation of the second P-cluster requires the concerted action of NifZ, Fe protein, and MgATP and that the action of NifZ is required before that of Fe protein/MgATP, suggesting that NifZ may act as a chaperone that facilitates the subsequent action of Fe protein/MgATP. Furthermore, we provide spectroscopic evidence that the [4Fe-4S] cluster-like fragments can be converted to P-clusters, thereby firmly establishing the physiological relevance of the previously identified P-cluster precursor.

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Year:  2007        PMID: 17563349      PMCID: PMC1965529          DOI: 10.1073/pnas.0704297104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Identification of an Fe protein residue (Glu146) of Azotobacter vinelandii nitrogenase that is specifically involved in FeMo cofactor insertion.

Authors:  M W Ribbe; E H Bursey; B K Burgess
Journal:  J Biol Chem       Date:  2000-06-09       Impact factor: 5.157

2.  Structure of a cofactor-deficient nitrogenase MoFe protein.

Authors:  Benedikt Schmid; Markus W Ribbe; Oliver Einsle; Mika Yoshida; Leonard M Thomas; Dennis R Dean; Douglas C Rees; Barbara K Burgess
Journal:  Science       Date:  2002-04-12       Impact factor: 47.728

3.  Mechanism of Molybdenum Nitrogenase.

Authors:  Barbara K. Burgess; David J. Lowe
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

4.  Nitrogenase MoFe-protein at 1.16 A resolution: a central ligand in the FeMo-cofactor.

Authors:  Oliver Einsle; F Akif Tezcan; Susana L A Andrade; Benedikt Schmid; Mika Yoshida; James B Howard; Douglas C Rees
Journal:  Science       Date:  2002-09-06       Impact factor: 47.728

5.  The role of methionine 156 in cross-subunit nucleotide interactions in the iron protein of nitrogenase.

Authors:  E H Bursey; B K Burgess
Journal:  J Biol Chem       Date:  1998-11-06       Impact factor: 5.157

6.  Redox properties and EPR spectroscopy of the P clusters of Azotobacter vinelandii MoFe protein.

Authors:  A J Pierik; H Wassink; H Haaker; W R Hagen
Journal:  Eur J Biochem       Date:  1993-02-15

7.  The FeMoco-deficient MoFe protein produced by a nifH deletion strain of Azotobacter vinelandii shows unusual P-cluster features.

Authors:  Markus W Ribbe; Yilin Hu; Maolin Guo; Benedikt Schmid; Barbara K Burgess
Journal:  J Biol Chem       Date:  2002-04-26       Impact factor: 5.157

8.  Characterization of Azotobacter vinelandii nifZ deletion strains. Indication of stepwise MoFe protein assembly.

Authors:  Yilin Hu; Aaron W Fay; Patricia C Dos Santos; Farzad Naderi; Markus W Ribbe
Journal:  J Biol Chem       Date:  2004-10-12       Impact factor: 5.157

9.  FeMo cofactor synthesis by a nifH mutant with altered MgATP reactivity.

Authors:  N Gavini; B K Burgess
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

10.  Vanadium-iron-sulfur clusters containing the cubane-type [VFe3S4] core unit: synthesis of a cluster with the topology of the PN cluster of nitrogenase.

Authors:  Jing-Lin Zuo; Hong-Cai Zhou; R H Holm
Journal:  Inorg Chem       Date:  2003-07-28       Impact factor: 5.165

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  28 in total

Review 1.  Biosynthesis of nitrogenase metalloclusters.

Authors:  Markus W Ribbe; Yilin Hu; Keith O Hodgson; Britt Hedman
Journal:  Chem Rev       Date:  2013-12-13       Impact factor: 60.622

2.  Role of RNA secondary structure and processing in stability of the nifH1 transcript in the cyanobacterium Anabaena variabilis.

Authors:  Brenda S Pratte; Justin Ungerer; Teresa Thiel
Journal:  J Bacteriol       Date:  2015-02-09       Impact factor: 3.490

Review 3.  Nitrogenase assembly.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  Biochim Biophys Acta       Date:  2012-12-08

4.  ATP-independent substrate reduction by nitrogenase P-cluster variant.

Authors:  Chi Chung Lee; Yilin Hu; Markus W Ribbe
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-16       Impact factor: 11.205

Review 5.  Biosynthesis of the metalloclusters of molybdenum nitrogenase.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  Microbiol Mol Biol Rev       Date:  2011-12       Impact factor: 11.056

Review 6.  Electron Transfer in Nitrogenase.

Authors:  Hannah L Rutledge; F Akif Tezcan
Journal:  Chem Rev       Date:  2020-01-30       Impact factor: 60.622

7.  Evolution of molybdenum nitrogenase during the transition from anaerobic to aerobic metabolism.

Authors:  Eric S Boyd; Amaya M Garcia Costas; Trinity L Hamilton; Florence Mus; John W Peters
Journal:  J Bacteriol       Date:  2015-03-02       Impact factor: 3.490

8.  A sterile alpha-motif domain in NafY targets apo-NifDK for iron-molybdenum cofactor delivery via a tethered domain.

Authors:  Jose A Hernandez; Aaron H Phillips; W Kaya Erbil; Dehua Zhao; Marie Demuez; Cathleen Zeymer; Jeffery G Pelton; David E Wemmer; Luis M Rubio
Journal:  J Biol Chem       Date:  2010-12-14       Impact factor: 5.157

9.  P+ state of nitrogenase p-cluster exhibits electronic structure of a [Fe4S4]+ cluster.

Authors:  Kresimir Rupnik; Yilin Hu; Chi Chung Lee; Jared A Wiig; Markus W Ribbe; Brian J Hales
Journal:  J Am Chem Soc       Date:  2012-08-08       Impact factor: 15.419

10.  Stepwise formation of P-cluster in nitrogenase MoFe protein.

Authors:  Chi Chung Lee; Michael A Blank; Aaron W Fay; Janice M Yoshizawa; Yilin Hu; Keith O Hodgson; Britt Hedman; Markus W Ribbe
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-14       Impact factor: 11.205

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