Literature DB >> 17560837

Recovery of cell cycle delay following targeted gene repair by oligonucleotides.

Luciana Ferrara1, Julia U Engstrom, Timothy Schwartz, Hetal Parekh-Olmedo, Eric B Kmiec.   

Abstract

We have previously shown that activation of the homologous recombinational repair pathway leads to a block of cell division in corrected cells, possibly through the activity of checkpoint proteins Chk1 and Chk2. In this study, we examine the long-term impact of this stalling on the growth of cells that have enabled gene repair events. Using a mutated eGFP gene as an episomal reporter, we show that corrected (eGFP-positive) cells contain only a few active replication templates 2 weeks after electroporation, yet do not display an apoptotic or senescent phenotype. By 6 weeks after electroporation, cells resume active replication with a cell cycle profile that is comparable to that of the non-corrected (eGFP-negative) population. These results indicate that the initial stalling is transient and eGFP-positive cells eventually resume a normal phenotypic growth pattern, allowing for passaging and expansion in vitro.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17560837      PMCID: PMC2083256          DOI: 10.1016/j.dnarep.2007.04.007

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  21 in total

1.  Single-stranded DNA induces ataxia telangiectasia mutant (ATM)/p53-dependent DNA damage and apoptotic signals.

Authors:  Alam Nur-E-Kamal; Tsai-Kun Li; Ailing Zhang; Haiyan Qi; Eszter S Hars; Leroy F Liu
Journal:  J Biol Chem       Date:  2003-01-21       Impact factor: 5.157

Review 2.  Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints.

Authors:  Aziz Sancar; Laura A Lindsey-Boltz; Keziban Unsal-Kaçmaz; Stuart Linn
Journal:  Annu Rev Biochem       Date:  2004       Impact factor: 23.643

3.  DNA replication and transcription direct a DNA strand bias in the process of targeted gene repair in mammalian cells.

Authors:  Erin E Brachman; Eric B Kmiec
Journal:  J Cell Sci       Date:  2004-07-20       Impact factor: 5.285

4.  A biomarker that identifies senescent human cells in culture and in aging skin in vivo.

Authors:  G P Dimri; X Lee; G Basile; M Acosta; G Scott; C Roskelley; E E Medrano; M Linskens; I Rubelj; O Pereira-Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

5.  Induction of apoptosis by telomere 3' overhang-specific DNA.

Authors:  Mark S Eller; Neelu Puri; Ina M Hadshiew; Suraj S Venna; Barbara A Gilchrest
Journal:  Exp Cell Res       Date:  2002-06-10       Impact factor: 3.905

6.  Enhanced oligonucleotide-directed gene targeting in mammalian cells following treatment with DNA damaging agents.

Authors:  Luciana Ferrara; Hetal Parekh-Olmedo; Eric B Kmiec
Journal:  Exp Cell Res       Date:  2004-10-15       Impact factor: 3.905

7.  Camptothecin cytotoxicity in mammalian cells is associated with the induction of persistent double strand breaks in replicating DNA.

Authors:  A J Ryan; S Squires; H L Strutt; R T Johnson
Journal:  Nucleic Acids Res       Date:  1991-06-25       Impact factor: 16.971

8.  Branched oligonucleotides induce in vivo gene conversion of a mutated EGFP reporter.

Authors:  P A Olsen; C McKeen; S Krauss
Journal:  Gene Ther       Date:  2003-10       Impact factor: 5.250

9.  Camptothecin enhances the frequency of oligonucleotide-directed gene repair in mammalian cells by inducing DNA damage and activating homologous recombination.

Authors:  Luciana Ferrara; Eric B Kmiec
Journal:  Nucleic Acids Res       Date:  2004-10-05       Impact factor: 16.971

10.  Evidence that exposure of the telomere 3' overhang sequence induces senescence.

Authors:  Guang-Zhi Li; Mark S Eller; Reza Firoozabadi; Barbara A Gilchrest
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-06       Impact factor: 11.205

View more
  14 in total

1.  Oligonucleotide delivery by nucleofection does not rescue the reduced proliferation phenotype of gene-edited cells.

Authors:  Paula Livingston; Bryan Strouse; Haley Perry; Mandula Borjigin; Pawel Bialk; Eric B Kmiec
Journal:  Nucleic Acid Ther       Date:  2012-10-16       Impact factor: 5.486

2.  Regulation of Gene Editing Activity Directed by Single-Stranded Oligonucleotides and CRISPR/Cas9 Systems.

Authors:  Pawel Bialk; Natalia Rivera-Torres; Bryan Strouse; Eric B Kmiec
Journal:  PLoS One       Date:  2015-06-08       Impact factor: 3.240

3.  DNA breakage associated with targeted gene alteration directed by DNA oligonucleotides.

Authors:  Melissa Bonner; Eric B Kmiec
Journal:  Mutat Res       Date:  2009-05-20       Impact factor: 2.433

Review 4.  An update on targeted gene repair in mammalian cells: methods and mechanisms.

Authors:  Nanna M Jensen; Trine Dalsgaard; Maria Jakobsen; Roni R Nielsen; Charlotte B Sørensen; Lars Bolund; Thomas G Jensen
Journal:  J Biomed Sci       Date:  2011-02-02       Impact factor: 8.410

5.  Combinatorial gene editing in mammalian cells using ssODNs and TALENs.

Authors:  Bryan Strouse; Pawel Bialk; Rohina A Niamat; Natalia Rivera-Torres; Eric B Kmiec
Journal:  Sci Rep       Date:  2014-01-21       Impact factor: 4.379

Review 6.  Towards a new era in medicine: therapeutic genome editing.

Authors:  Matthew H Porteus
Journal:  Genome Biol       Date:  2015-12-22       Impact factor: 13.583

7.  Analyses of point mutation repair and allelic heterogeneity generated by CRISPR/Cas9 and single-stranded DNA oligonucleotides.

Authors:  Pawel Bialk; Brett Sansbury; Natalia Rivera-Torres; Kevin Bloh; Dula Man; Eric B Kmiec
Journal:  Sci Rep       Date:  2016-09-09       Impact factor: 4.379

8.  DNA damage response pathway and replication fork stress during oligonucleotide directed gene editing.

Authors:  Melissa Bonner; Bryan Strouse; Mindy Applegate; Paula Livingston; Eric B Kmiec
Journal:  Mol Ther Nucleic Acids       Date:  2012-04-03       Impact factor: 10.183

9.  Proliferation of genetically modified human cells on electrospun nanofiber scaffolds.

Authors:  Mandula Borjigin; Bryan Strouse; Rohina A Niamat; Pawel Bialk; Chris Eskridge; Jingwei Xie; Eric B Kmiec
Journal:  Mol Ther Nucleic Acids       Date:  2012-12-04       Impact factor: 10.183

10.  Simultaneous targeted exchange of two nucleotides by single-stranded oligonucleotides clusters within a region of about fourteen nucleotides.

Authors:  Heike Hegele; Matthias Wuepping; Caroline Ref; Oliver Kenner; Dieter Kaufmann
Journal:  BMC Mol Biol       Date:  2008-01-28       Impact factor: 2.946

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.