Literature DB >> 17554182

Crystallization and preliminary X-ray crystallographic studies of the [NiFe] hydrogenase maturation proteins HypC and HypD.

Satoshi Watanabe1, Rie Matsumi, Haruyuki Atomi, Tadayuki Imanaka, Kunio Miki.   

Abstract

HypC and HypD proteins are required for the insertion of the Fe atom with diatomic ligands into the large subunit of [NiFe] hydrogenases, an important step in the maturation process of this type of hydrogenase. The crystallization and preliminary crystallographic analysis of HypC and HypD from Thermococcus kodakaraensis KOD1 are reported. Crystals of HypC grew in two different forms. Monoclinic crystals of HypC in space group C2 with unit-cell parameters a = 78.2, b = 59.1, c = 54.0 A, beta = 109.0 degrees were obtained using PEG 4000 and ammonium sulfate or sodium bromide as precipitants. They diffracted X-rays to 1.8 A resolution and were suitable for structure determination. Crystals of HypD were also obtained in two different forms. The monoclinic crystals obtained using PEG 4000 and magnesium chloride diffracted X-rays to beyond 2.1 A resolution, despite growing as clusters. They belong to space group P2(1), with unit-cell parameters a = 42.3, b = 118.4, c = 81.2 A, beta = 100.9 degrees , and are suitable for data collection.

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Year:  2007        PMID: 17554182      PMCID: PMC2335088          DOI: 10.1107/S1744309107023391

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  20 in total

Review 1.  Classification and phylogeny of hydrogenases.

Authors:  P M Vignais; B Billoud; J Meyer
Journal:  FEMS Microbiol Rev       Date:  2001-08       Impact factor: 16.408

Review 2.  Maturation of the [NiFe] hydrogenases.

Authors:  L Casalot; M Rousset
Journal:  Trends Microbiol       Date:  2001-05       Impact factor: 17.079

Review 3.  Metal insertion into NiFe-hydrogenases.

Authors:  M Blokesch; A Paschos; E Theodoratou; A Bauer; M Hube; S Huth; A Böck
Journal:  Biochem Soc Trans       Date:  2002-08       Impact factor: 5.407

4.  Crystal structure of the hydrogenase maturating endopeptidase HYBD from Escherichia coli.

Authors:  E Fritsche; A Paschos; H G Beisel; A Böck; R Huber
Journal:  J Mol Biol       Date:  1999-05-21       Impact factor: 5.469

5.  The complex between hydrogenase-maturation proteins HypC and HypD is an intermediate in the supply of cyanide to the active site iron of [NiFe]-hydrogenases.

Authors:  Melanie Blokesch; Simon P J Albracht; Berthold F Matzanke; Nikola M Drapal; Alexander Jacobi; August Böck
Journal:  J Mol Biol       Date:  2004-11-12       Impact factor: 5.469

6.  Taming of a poison: biosynthesis of the NiFe-hydrogenase cyanide ligands.

Authors:  Stefanie Reissmann; Elisabeth Hochleitner; Haofan Wang; Athanasios Paschos; Friedrich Lottspeich; Richard S Glass; August Böck
Journal:  Science       Date:  2003-02-14       Impact factor: 47.728

7.  Requirement of nickel metabolism proteins HypA and HypB for full activity of both hydrogenase and urease in Helicobacter pylori.

Authors:  J W Olson; N S Mehta; R J Maier
Journal:  Mol Microbiol       Date:  2001-01       Impact factor: 3.501

8.  Analysis of the transcarbamoylation-dehydration reaction catalyzed by the hydrogenase maturation proteins HypF and HypE.

Authors:  Melanie Blokesch; Athanasios Paschos; Anette Bauer; Stefanie Reissmann; Nikola Drapal; August Böck
Journal:  Eur J Biochem       Date:  2004-08

9.  Maturation of [NiFe]-hydrogenases in Escherichia coli: the HypC cycle.

Authors:  Melanie Blokesch; August Böck
Journal:  J Mol Biol       Date:  2002-11-22       Impact factor: 5.469

10.  The hyp operon gene products are required for the maturation of catalytically active hydrogenase isoenzymes in Escherichia coli.

Authors:  A Jacobi; R Rossmann; A Böck
Journal:  Arch Microbiol       Date:  1992       Impact factor: 2.552

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  1 in total

1.  Electron inventory of the iron-sulfur scaffold complex HypCD essential in [NiFe]-hydrogenase cofactor assembly.

Authors:  Sven T Stripp; Jonathan Oltmanns; Christina S Müller; David Ehrenberg; Ramona Schlesinger; Joachim Heberle; Lorenz Adrian; Volker Schünemann; Antonio J Pierik; Basem Soboh
Journal:  Biochem J       Date:  2021-09-17       Impact factor: 3.857

  1 in total

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