Literature DB >> 17550311

Clinical laboratory reports in molecular pathology.

Margaret L Gulley1, Rita M Braziel, Kevin C Halling, Eric D Hsi, Jeffrey A Kant, Marina N Nikiforova, Jan A Nowak, Shuji Ogino, Andre Oliveira, Herbert F Polesky, Lawrence Silverman, Raymond R Tubbs, Vivianna M Van Deerlin, Gail H Vance, James Versalovic.   

Abstract

CONTEXT: Molecular pathology is a rapidly growing area of laboratory medicine in which DNA and RNA are analyzed. The recent introduction of array technology has added another layer of complexity involving massive parallel analysis of multiple genes, transcripts, or proteins.
OBJECTIVE: As molecular technologies are increasingly implemented in clinical settings, it is important to bring uniformity to the way that test results are reported. DATA SOURCES: The College of American Pathologists Molecular Pathology Resource Committee members summarize elements that are already common to virtually all molecular pathology reports, as set forth in the College of American Pathologists checklists used in the laboratory accreditation process. Consensus recommendations are proposed to improve report format and content, and areas of controversy are discussed. Resources are cited that promote use of proper gene nomenclature and that describe methods for reporting mutations, translocations, microsatellite instability, and other genetic alterations related to inherited disease, cancer, identity testing, microbiology, and pharmacogenetics.
CONCLUSIONS: These resources and recommendations provide a framework for composing patient reports to convey molecular test results and their clinical significance to members of the health care team.

Entities:  

Mesh:

Year:  2007        PMID: 17550311     DOI: 10.5858/2007-131-852-CLRIMP

Source DB:  PubMed          Journal:  Arch Pathol Lab Med        ISSN: 0003-9985            Impact factor:   5.534


  36 in total

Review 1.  Quality assurance of RNA expression profiling in clinical laboratories.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  J Mol Diagn       Date:  2011-10-20       Impact factor: 5.568

2.  Consensus: a framework for evaluation of uncertain gene variants in laboratory test reporting.

Authors:  David K Crockett; Perry G Ridge; Andrew R Wilson; Elaine Lyon; Marc S Williams; Scott P Narus; Julio C Facelli; Joyce A Mitchell
Journal:  Genome Med       Date:  2012-05-28       Impact factor: 11.117

Review 3.  Endorsing good quality assurance practices in molecular pathology: risks and recommendations for diagnostic laboratories and external quality assessment providers.

Authors:  Lien Tembuyser; Elisabeth M C Dequeker
Journal:  Virchows Arch       Date:  2015-08-26       Impact factor: 4.064

4.  Clinician perspectives about molecular genetic testing for heritable conditions and development of a clinician-friendly laboratory report.

Authors:  Ira M Lubin; Margaret M McGovern; Zoe Gibson; Susan J Gross; Elaine Lyon; Roberta A Pagon; Victoria M Pratt; Jamila Rashid; Colleen Shaw; Lander Stoddard; Tracy L Trotter; Marc S Williams; Jean Amos Wilson; Kenneth Pass
Journal:  J Mol Diagn       Date:  2009-02-05       Impact factor: 5.568

5.  Quality Assessment of Reporting Performance for EGFR Molecular Diagnosis in Non-Small Cell Lung Cancer.

Authors:  Yanxi Han; Rui Zhang; Guigao Lin; Kuo Zhang; Jiehong Xie; Jinming Li
Journal:  Oncologist       Date:  2017-07-12

6.  Ordering molecular genetic tests and reporting results: practices in laboratory and clinical settings.

Authors:  Ira M Lubin; Michele Caggana; Carolyn Constantin; Susan J Gross; Elaine Lyon; Roberta A Pagon; Tracy L Trotter; Jean Amos Wilson; Margaret M McGovern
Journal:  J Mol Diagn       Date:  2008-07-31       Impact factor: 5.568

Review 7.  Genetic tests to evaluate prognosis and predict therapeutic response in acute myeloid leukemia.

Authors:  Margaret L Gulley; Thomas C Shea; Yuri Fedoriw
Journal:  J Mol Diagn       Date:  2009-12-03       Impact factor: 5.568

Review 8.  How many molecular subtypes? Implications of the unique tumor principle in personalized medicine.

Authors:  Shuji Ogino; Charles S Fuchs; Edward Giovannucci
Journal:  Expert Rev Mol Diagn       Date:  2012-07       Impact factor: 5.225

9.  Locus Reference Genomic sequences: an improved basis for describing human DNA variants.

Authors:  Raymond Dalgleish; Paul Flicek; Fiona Cunningham; Alex Astashyn; Raymond E Tully; Glenn Proctor; Yuan Chen; William M McLaren; Pontus Larsson; Brendan W Vaughan; Christophe Béroud; Glen Dobson; Heikki Lehväslaiho; Peter Em Taschner; Johan T den Dunnen; Andrew Devereau; Ewan Birney; Anthony J Brookes; Donna R Maglott
Journal:  Genome Med       Date:  2010-04-15       Impact factor: 11.117

10.  NCBI Reference Sequences: current status, policy and new initiatives.

Authors:  Kim D Pruitt; Tatiana Tatusova; William Klimke; Donna R Maglott
Journal:  Nucleic Acids Res       Date:  2008-10-16       Impact factor: 16.971

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