Literature DB >> 17546995

Description of mechanical response including detachment using a novel particle model of biofilm/flow interaction.

E Alpkvist1, I Klapper.   

Abstract

Bacterial biofilms, while made up of microbial-scale objects, also function as meso- and macroscale materials. In particular, macro-scale material properties determine how biofilms respond to large-scale mechanical stresses, e.g. fluid shear. Viscoelastic and other constitutive properties influence biomass structure (through growth and fluid shear stresses) by erosion and sloughing detachment. In this paper, using the immersed boundary method, biofilm is modelled by a system of viscoelastic, breakable springs embedded in a fluid flow, evolving according to the basic physical laws of conservation of mass and momentum. We demonstrate in the context of computer simulation biofilm deformation and detachment under fluid shear stress.

Mesh:

Year:  2007        PMID: 17546995     DOI: 10.2166/wst.2007.267

Source DB:  PubMed          Journal:  Water Sci Technol        ISSN: 0273-1223            Impact factor:   1.915


  19 in total

1.  Multiphase flow models of biogels from crawling cells to bacterial biofilms.

Authors:  N G Cogan; Robert D Guy
Journal:  HFSP J       Date:  2010-02-12

2.  Live-streaming: Time-lapse video evidence of novel streamer formation mechanism and varying viscosity.

Authors:  Mazeyar Parvinzadeh Gashti; Julien Bellavance; Otini Kroukamp; Gideon Wolfaardt; Seyed Mohammad Taghavi; Jesse Greener
Journal:  Biomicrofluidics       Date:  2015-08-06       Impact factor: 2.800

3.  Multicomponent model of deformation and detachment of a biofilm under fluid flow.

Authors:  Giordano Tierra; Juan P Pavissich; Robert Nerenberg; Zhiliang Xu; Mark S Alber
Journal:  J R Soc Interface       Date:  2015-05-06       Impact factor: 4.118

4.  Modelling mechanical characteristics of microbial biofilms by network theory.

Authors:  Alexander E Ehret; Markus Böl
Journal:  J R Soc Interface       Date:  2012-11-08       Impact factor: 4.118

5.  Variable cell morphology approach for individual-based modeling of microbial communities.

Authors:  Tomas Storck; Cristian Picioreanu; Bernardino Virdis; Damien J Batstone
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

6.  On the origin of biological construction, with a focus on multicellularity.

Authors:  Jordi van Gestel; Corina E Tarnita
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-29       Impact factor: 11.205

7.  Differential lipopolysaccharide core capping leads to quantitative and correlated modifications of mechanical and structural properties in Pseudomonas aeruginosa biofilms.

Authors:  Peter C Y Lau; Theresa Lindhout; Terry J Beveridge; John R Dutcher; Joseph S Lam
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490

8.  Biofilm responses to smooth flow fields and chemical gradients in novel microfluidic flow cells.

Authors:  Jisun L Song; Kelly H Au; Kimberly T Huynh; Aaron I Packman
Journal:  Biotechnol Bioeng       Date:  2013-09-30       Impact factor: 4.530

9.  A mass-spring model unveils the morphogenesis of phototrophic Diatoma biofilms.

Authors:  K Celler; I Hödl; A Simone; T J Battin; C Picioreanu
Journal:  Sci Rep       Date:  2014-01-13       Impact factor: 4.379

Review 10.  Agent-based modelling in synthetic biology.

Authors:  Thomas E Gorochowski
Journal:  Essays Biochem       Date:  2016-11-30       Impact factor: 8.000

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