Literature DB >> 17544442

Domain topology of the p62 complex within the 3-D architecture of the nuclear pore complex.

Kyrill Schwarz-Herion1, Bohumil Maco, Ursula Sauder, Birthe Fahrenkrog.   

Abstract

The nuclear pore complex (NPC) is the only known gateway for exchange of macromolecules between the cytoplasm and nucleus of eukaryotic cells. One key compound of the NPC is the p62 subcomplex, which consists of the nucleoporins p62, p54, and p58/p45 and is supposed to be involved in nuclear protein import and export. Here we show the localization of distinct domains of the p62 complex by immuno-electron microscopy using isolated nuclei from Xenopus oocytes. To determine the exact position of the p62 complex, we examined the localization of the C and N-terminal domains of p62 by immunogold-labeling using domain-specific antibodies against p62. In addition we expressed epitope-tagged versions of p62, p54, and p58 in Xenopus oocytes and localized the domains with antibodies against the tags. This first systematic analysis of the domain topology of the p62 complex within the NPC revealed that the p62 complex is anchored to the cytoplasmic face of the NPC most likely by the coiled-coil domains of the three nucleoporins. Furthermore, we found the phenylalanine-glycine (FG)-repeat domain of p62, but not of p58 and p54, to be of mobile and flexible nature.

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Year:  2007        PMID: 17544442     DOI: 10.1016/j.jmb.2007.05.030

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  20 in total

1.  Probing a structural model of the nuclear pore complex channel through molecular dynamics.

Authors:  Lingling Miao; Klaus Schulten
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

2.  Contribution of host nucleoporin 62 in HIV-1 integrase chromatin association and viral DNA integration.

Authors:  Zhujun Ao; Kallesh Danappa Jayappa; Binchen Wang; Yingfeng Zheng; Xiaoxia Wang; Jinyu Peng; Xiaojian Yao
Journal:  J Biol Chem       Date:  2012-02-03       Impact factor: 5.157

Review 3.  Biology and biophysics of the nuclear pore complex and its components.

Authors:  Roderick Y H Lim; Katharine S Ullman; Birthe Fahrenkrog
Journal:  Int Rev Cell Mol Biol       Date:  2008       Impact factor: 6.813

Review 4.  Dynamics and diverse functions of nuclear pore complex proteins.

Authors:  Guillaume Chatel; Birthe Fahrenkrog
Journal:  Nucleus       Date:  2012-03-01       Impact factor: 4.197

5.  Structural characterization of altered nucleoporin Nup153 expression in human cells by thin-section electron microscopy.

Authors:  Vincent Duheron; Guillaume Chatel; Ursula Sauder; Vesna Oliveri; Birthe Fahrenkrog
Journal:  Nucleus       Date:  2014       Impact factor: 4.197

6.  Probing nuclear pore complex architecture with proximity-dependent biotinylation.

Authors:  Dae In Kim; K C Birendra; Wenhong Zhu; Khatereh Motamedchaboki; Valérie Doye; Kyle J Roux
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-03       Impact factor: 11.205

7.  Karyopherin-centric control of nuclear pores based on molecular occupancy and kinetic analysis of multivalent binding with FG nucleoporins.

Authors:  Larisa E Kapinos; Rafael L Schoch; Raphael S Wagner; Kai D Schleicher; Roderick Y H Lim
Journal:  Biophys J       Date:  2014-04-15       Impact factor: 4.033

8.  Specific armadillo repeat sequences facilitate β-catenin nuclear transport in live cells via direct binding to nucleoporins Nup62, Nup153, and RanBP2/Nup358.

Authors:  Manisha Sharma; Cara Jamieson; Michael Johnson; Mark P Molloy; Beric R Henderson
Journal:  J Biol Chem       Date:  2011-11-21       Impact factor: 5.157

9.  Domain topology of nucleoporin Nup98 within the nuclear pore complex.

Authors:  Guillaume Chatel; Sachin H Desai; Alexa L Mattheyses; Maureen A Powers; Birthe Fahrenkrog
Journal:  J Struct Biol       Date:  2011-11-12       Impact factor: 2.867

10.  Mengovirus-induced rearrangement of the nuclear pore complex: hijacking cellular phosphorylation machinery.

Authors:  Maryana V Bardina; Peter V Lidsky; Eugene V Sheval; Ksenia V Fominykh; Frank J M van Kuppeveld; Vladimir Y Polyakov; Vadim I Agol
Journal:  J Virol       Date:  2009-01-14       Impact factor: 5.103

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