Literature DB >> 17539975

FISH mapping of 57 BAC clones reveals strong conservation of synteny between Galliformes and Anseriformes.

V Fillon1, M Vignoles, R P M A Crooijmans, M A M Groenen, R Zoorob, A Vignal.   

Abstract

Karyotypes of chicken (Gallus gallus domesticus; 2n = 78) and mallard duck (Anas platyrhynchos; 2n = 80) share the typical organization of avian karyotypes including a few macrochromosome pairs, numerous indistinguishable microchromosomes, and Z and W sex chromosomes. Previous banding studies revealed great similarities between chickens and ducks, but it was not possible to use comparative banding for the microchromosomes. In order to establish precise chromosome correspondences between these two species, particularly for microchromosomes, we hybridized 57 BAC clones previously assigned to the chicken genome to duck metaphase spreads. Although most of the clones showed similar localizations, we found a few intrachromosomal rearrangements of the macrochromosomes and an additional microchromosome pair in ducks. BAC clones specific for chicken microchromosomes were localized to separate duck microchromosomes and clones mapping to the same chicken microchromosome hybridized to the same duck microchromosome, demonstrating a high conservation of synteny. These results demonstrate that the evolution of karyotypes in avian species is the result of fusion and/or fission processes and not translocations.

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Year:  2007        PMID: 17539975     DOI: 10.1111/j.1365-2052.2007.01578.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  14 in total

1.  Novel tools for characterising inter and intra chromosomal rearrangements in avian microchromosomes.

Authors:  Pamela E Lithgow; Rebecca O'Connor; Deborah Smith; Gothami Fonseka; Abdullah Al Mutery; Claudia Rathje; Richard Frodsham; Patricia O'Brien; Fumio Kasai; Malcolm A Ferguson-Smith; Benjamin M Skinner; Darren K Griffin
Journal:  Chromosome Res       Date:  2014-04       Impact factor: 5.239

2.  New resources inform study of genome size, content, and organization in nonavian reptiles.

Authors:  Daniel E Janes; Christopher Organ; Nicole Valenzuela
Journal:  Integr Comp Biol       Date:  2008-03-16       Impact factor: 3.326

3.  A gene-based genetic linkage map of the collared flycatcher (Ficedula albicollis) reveals extensive synteny and gene-order conservation during 100 million years of avian evolution.

Authors:  Niclas Backström; Nikoletta Karaiskou; Erica H Leder; Lars Gustafsson; Craig R Primmer; Anna Qvarnström; Hans Ellegren
Journal:  Genetics       Date:  2008-06-18       Impact factor: 4.562

4.  Molecular cytogenetics of the california condor: evolutionary and conservation implications.

Authors:  W S Modi; M Romanov; E D Green; O Ryder
Journal:  Cytogenet Genome Res       Date:  2009-12-29       Impact factor: 1.636

5.  Meiotic recombination analysis in female ducks (Anas platyrhynchos).

Authors:  M I Pigozzi; L Del Priore
Journal:  Genetica       Date:  2016-04-26       Impact factor: 1.082

6.  A duck RH panel and its potential for assisting NGS genome assembly.

Authors:  Man Rao; Mireille Morisson; Thomas Faraut; Suzanne Bardes; Katia Fève; Emmanuelle Labarthe; Valérie Fillon; Yinhua Huang; Ning Li; Alain Vignal
Journal:  BMC Genomics       Date:  2012-09-28       Impact factor: 3.969

7.  Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos).

Authors:  Robert H S Kraus; Hindrik H D Kerstens; Pim Van Hooft; Richard P M A Crooijmans; Jan J Van Der Poel; Johan Elmberg; Alain Vignal; Yinhua Huang; Ning Li; Herbert H T Prins; Martien A M Groenen
Journal:  BMC Genomics       Date:  2011-03-16       Impact factor: 3.969

8.  Comparative genomics in chicken and Pekin duck using FISH mapping and microarray analysis.

Authors:  Benjamin M Skinner; Lindsay B W Robertson; Helen G Tempest; Elizabeth J Langley; Dimitris Ioannou; Katie E Fowler; Richard P M A Crooijmans; Anthony D Hall; Darren K Griffin; Martin Völker
Journal:  BMC Genomics       Date:  2009-08-05       Impact factor: 3.969

9.  Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution.

Authors:  Darren K Griffin; Lindsay B Robertson; Helen G Tempest; Alain Vignal; Valérie Fillon; Richard P M A Crooijmans; Martien A M Groenen; Svetlana Deryusheva; Elena Gaginskaya; Wilfrid Carré; David Waddington; Richard Talbot; Martin Völker; Julio S Masabanda; Dave W Burt
Journal:  BMC Genomics       Date:  2008-04-14       Impact factor: 3.969

Review 10.  Tracing the evolution of amniote chromosomes.

Authors:  Janine E Deakin; Tariq Ezaz
Journal:  Chromosoma       Date:  2014-03-25       Impact factor: 4.316

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