Literature DB >> 17535921

Designing an extracellular matrix protein with enhanced mechanical stability.

Sean P Ng1, Kate S Billings, Tomoo Ohashi, Mark D Allen, Robert B Best, Lucy G Randles, Harold P Erickson, Jane Clarke.   

Abstract

The extracellular matrix proteins tenascin and fibronectin experience significant mechanical forces in vivo. Both contain a number of tandem repeating homologous fibronectin type III (fnIII) domains, and atomic force microscopy experiments have demonstrated that the mechanical strength of these domains can vary significantly. Previous work has shown that mutations in the core of an fnIII domain from human tenascin (TNfn3) reduce the unfolding force of that domain significantly: The composition of the core is apparently crucial to the mechanical stability of these proteins. Based on these results, we have used rational redesign to increase the mechanical stability of the 10th fnIII domain of human fibronectin, FNfn10, which is directly involved in integrin binding. The hydrophobic core of FNfn10 was replaced with that of the homologous, mechanically stronger TNfn3 domain. Despite the extensive substitution, FNoTNc retains both the three-dimensional structure and the cell adhesion activity of FNfn10. Atomic force microscopy experiments reveal that the unfolding forces of the engineered protein FNoTNc increase by approximately 20% to match those of TNfn3. Thus, we have specifically designed a protein with increased mechanical stability. Our results demonstrate that core engineering can be used to change the mechanical strength of proteins while retaining functional surface interactions.

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Year:  2007        PMID: 17535921      PMCID: PMC1887552          DOI: 10.1073/pnas.0609901104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Two proteins with the same structure respond very differently to mutation: the role of plasticity in protein stability.

Authors:  E Cota; S J Hamill; S B Fowler; J Clarke
Journal:  J Mol Biol       Date:  2000-09-22       Impact factor: 5.469

Review 2.  Robotic nanolitre protein crystallisation at the MRC Laboratory of Molecular Biology.

Authors:  Daniela Stock; Olga Perisic; Jan Löwe
Journal:  Prog Biophys Mol Biol       Date:  2004-09-30       Impact factor: 3.667

3.  Engineering proteins with novel mechanical properties by recombination of protein fragments.

Authors:  Deepak Sharma; Yi Cao; Hongbin Li
Journal:  Angew Chem Int Ed Engl       Date:  2006-08-25       Impact factor: 15.336

4.  Structural requirements for biological activity of the ninth and tenth FIII domains of human fibronectin.

Authors:  R P Grant; C Spitzfaden; H Altroff; I D Campbell; H J Mardon
Journal:  J Biol Chem       Date:  1997-03-07       Impact factor: 5.157

5.  The molecular elasticity of the extracellular matrix protein tenascin.

Authors:  A F Oberhauser; P E Marszalek; H P Erickson; J M Fernandez
Journal:  Nature       Date:  1998-05-14       Impact factor: 49.962

6.  Neutrophil motility in extracellular matrix gels: mesh size and adhesion affect speed of migration.

Authors:  R M Kuntz; W M Saltzman
Journal:  Biophys J       Date:  1997-03       Impact factor: 4.033

7.  Recognition of fibronectin by the platelet integrin alpha IIb beta 3 involves an extended interface with multiple electrostatic interactions.

Authors:  A C Kauf; S M Hough; R D Bowditch
Journal:  Biochemistry       Date:  2001-08-07       Impact factor: 3.162

8.  2.0 A crystal structure of a four-domain segment of human fibronectin encompassing the RGD loop and synergy region.

Authors:  D J Leahy; I Aukhil; H P Erickson
Journal:  Cell       Date:  1996-01-12       Impact factor: 41.582

9.  Crystal structure of the tenth type III cell adhesion module of human fibronectin.

Authors:  C D Dickinson; B Veerapandian; X P Dai; R C Hamlin; N H Xuong; E Ruoslahti; K R Ely
Journal:  J Mol Biol       Date:  1994-03-04       Impact factor: 5.469

10.  Defining fibronectin's cell adhesion synergy site by site-directed mutagenesis.

Authors:  S D Redick; D L Settles; G Briscoe; H P Erickson
Journal:  J Cell Biol       Date:  2000-04-17       Impact factor: 10.539

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  23 in total

1.  Mechanical anisotropy of ankyrin repeats.

Authors:  Whasil Lee; Xiancheng Zeng; Kristina Rotolo; Ming Yang; Christopher J Schofield; Vann Bennett; Weitao Yang; Piotr E Marszalek
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Contribution of unfolding and intermolecular architecture to fibronectin fiber extensibility.

Authors:  Mark J Bradshaw; Michael L Smith
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

3.  Engineering proteins with enhanced mechanical stability by force-specific sequence motifs.

Authors:  Wenzhe Lu; Surendra S Negi; Andres F Oberhauser; Werner Braun
Journal:  Proteins       Date:  2012-02-10

Review 4.  Probing cellular microenvironments and tissue remodeling by atomic force microscopy.

Authors:  Thomas Ludwig; Robert Kirmse; Kate Poole; Ulrich S Schwarz
Journal:  Pflugers Arch       Date:  2007-12-06       Impact factor: 3.657

5.  Computational and single-molecule force studies of a macro domain protein reveal a key molecular determinant for mechanical stability.

Authors:  Dora L Guzmán; Arlo Randall; Pierre Baldi; Zhibin Guan
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-13       Impact factor: 11.205

6.  The effect of temperature on mechanical resistance of the native and intermediate states of I27.

Authors:  Yukinori Taniguchi; David J Brockwell; Masaru Kawakami
Journal:  Biophys J       Date:  2008-09-05       Impact factor: 4.033

7.  Single-molecule force spectroscopy distinguishes target binding modes of calmodulin.

Authors:  Jan Philipp Junker; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-10       Impact factor: 11.205

8.  Enhancing the mechanical stability of proteins through a cocktail approach.

Authors:  Yi Cao; Yongnan Devin Li; Hongbin Li
Journal:  Biophys J       Date:  2011-04-06       Impact factor: 4.033

9.  Identification of a mechanical rheostat in the hydrophobic core of protein L.

Authors:  David P Sadler; Eva Petrik; Yukinori Taniguchi; James R Pullen; Masaru Kawakami; Sheena E Radford; David J Brockwell
Journal:  J Mol Biol       Date:  2009-08-13       Impact factor: 5.469

10.  An effective strategy for the design of proteins with enhanced mechanical stability.

Authors:  Alessandro Borgia; Annette Steward; Jane Clarke
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

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