Literature DB >> 17534870

Janocchio--a Java applet for viewing 3D structures and calculating NMR couplings and NOEs.

David A Evans1, Michael J Bodkin, S Richard Baker, Gary J Sharman.   

Abstract

We present a Java applet, based on the open source Jmol program, which allows the calculation of coupling constants and NOEs from a three-dimensional structure. The program has all the viewing features of Jmol, but adds the capability to calculate both H-H and H-C 3-bond couplings constants. In the case of H--H couplings, the Altona equation is used to perform this. The program also calculates NOEs using the full relaxation matrix approach. All these calculations are driven from a simple point and click interface. The program can calculate values for multi-structure files, and can produce input files for the conformational fitting program NAMFIS. Copyright (c) 2007 John Wiley & Sons, Ltd.

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Year:  2007        PMID: 17534870     DOI: 10.1002/mrc.2016

Source DB:  PubMed          Journal:  Magn Reson Chem        ISSN: 0749-1581            Impact factor:   2.447


  2 in total

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  2 in total

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