Literature DB >> 17533415

Chemogenomic approaches to drug discovery: similar receptors bind similar ligands.

T Klabunde1.   

Abstract

Within recent years, a paradigm shift from traditional receptor-specific studies to a cross-receptor view has taken place within pharmaceutical research to increase the efficiency of modern drug discovery. Receptors are no longer viewed as single entities but grouped into sets of related proteins or receptor families that are explored in a systematic manner. This interdisciplinary approach attempting to derive predictive links between the chemical structures of bioactive molecules and the receptors with which these molecules interact is referred to as chemogenomics. Insights from chemogenomics are used for the rational compilation of screening sets and for the rational design and synthesis of directed chemical libraries to accelerate drug discovery.

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Year:  2007        PMID: 17533415      PMCID: PMC1978276          DOI: 10.1038/sj.bjp.0707308

Source DB:  PubMed          Journal:  Br J Pharmacol        ISSN: 0007-1188            Impact factor:   8.739


  7 in total

1.  The Nobel chronicles. 1988: James Whyte Black, (b 1924), Gertrude Elion (1918-99), and George H Hitchings (1905-98).

Authors:  T N Raju
Journal:  Lancet       Date:  2000-03-18       Impact factor: 79.321

Review 2.  Chemogenomic approaches to drug discovery.

Authors:  P R Caron; M D Mullican; R D Mashal; K P Wilson; M S Su; M A Murcko
Journal:  Curr Opin Chem Biol       Date:  2001-08       Impact factor: 8.822

3.  Property-based design of GPCR-targeted library.

Authors:  Konstantin V Balakin; Sergey E Tkachenko; Stanley A Lang; Ilya Okun; Andrey A Ivashchenko; Nikolay P Savchuk
Journal:  J Chem Inf Comput Sci       Date:  2002 Nov-Dec

Review 4.  Selective optimization of side activities: another way for drug discovery.

Authors:  Camille G Wermuth
Journal:  J Med Chem       Date:  2004-03-11       Impact factor: 7.446

5.  Virtual screen for ligands of orphan G protein-coupled receptors.

Authors:  Joel R Bock; David A Gough
Journal:  J Chem Inf Model       Date:  2005 Sep-Oct       Impact factor: 4.956

6.  A physicogenetic method to assign ligand-binding relationships between 7TM receptors.

Authors:  Thomas M Frimurer; Trond Ulven; Christian E Elling; Lars-Ole Gerlach; Evi Kostenis; Thomas Högberg
Journal:  Bioorg Med Chem Lett       Date:  2005-08-15       Impact factor: 2.823

Review 7.  Chemogenomic approaches to rational drug design.

Authors:  D Rognan
Journal:  Br J Pharmacol       Date:  2007-05-29       Impact factor: 8.739

  7 in total
  31 in total

1.  A structural chemogenomics analysis of aminergic GPCRs: lessons for histamine receptor ligand design.

Authors:  A J Kooistra; S Kuhne; I J P de Esch; R Leurs; C de Graaf
Journal:  Br J Pharmacol       Date:  2013-09       Impact factor: 8.739

2.  Chalcones as a basis for computer-aided drug design: innovative approaches to tackle malaria.

Authors:  Marilia Nn Lima; Bruno J Neves; Gustavo C Cassiano; Marcelo N Gomes; Kaira Cp Tomaz; Leticia T Ferreira; Tatyana A Tavella; Juliana Calit; Daniel Y Bargieri; Eugene N Muratov; Fabio Tm Costa; Carolina Horta Andrade
Journal:  Future Med Chem       Date:  2019-09-26       Impact factor: 3.808

Review 3.  Applications of chemogenomic library screening in drug discovery.

Authors:  Lyn H Jones; Mark E Bunnage
Journal:  Nat Rev Drug Discov       Date:  2017-01-20       Impact factor: 84.694

4.  ChEpiMod: a knowledgebase for chemical modulators of epigenome reader domains.

Authors:  Jamel Meslamani; Steven G Smith; Roberto Sanchez; Ming-Ming Zhou
Journal:  Bioinformatics       Date:  2014-01-27       Impact factor: 6.937

5.  TargetNet: a web service for predicting potential drug-target interaction profiling via multi-target SAR models.

Authors:  Zhi-Jiang Yao; Jie Dong; Yu-Jing Che; Min-Feng Zhu; Ming Wen; Ning-Ning Wang; Shan Wang; Ai-Ping Lu; Dong-Sheng Cao
Journal:  J Comput Aided Mol Des       Date:  2016-05-11       Impact factor: 3.686

6.  SwissTargetPrediction: a web server for target prediction of bioactive small molecules.

Authors:  David Gfeller; Aurélien Grosdidier; Matthias Wirth; Antoine Daina; Olivier Michielin; Vincent Zoete
Journal:  Nucleic Acids Res       Date:  2014-05-03       Impact factor: 16.971

7.  Protein-ligand interaction prediction: an improved chemogenomics approach.

Authors:  Laurent Jacob; Jean-Philippe Vert
Journal:  Bioinformatics       Date:  2008-08-01       Impact factor: 6.937

Review 8.  Machine learning for in silico virtual screening and chemical genomics: new strategies.

Authors:  Jean-Philippe Vert; Laurent Jacob
Journal:  Comb Chem High Throughput Screen       Date:  2008-09       Impact factor: 1.339

9.  A novel chemogenomics analysis of G protein-coupled receptors (GPCRs) and their ligands: a potential strategy for receptor de-orphanization.

Authors:  Eelke van der Horst; Julio E Peironcely; Adriaan P Ijzerman; Margot W Beukers; Jonathan R Lane; Herman W T van Vlijmen; Michael T M Emmerich; Yasushi Okuno; Andreas Bender
Journal:  BMC Bioinformatics       Date:  2010-06-10       Impact factor: 3.169

10.  Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction.

Authors:  Drew H Bryant; Mark Moll; Brian Y Chen; Viacheslav Y Fofanov; Lydia E Kavraki
Journal:  BMC Bioinformatics       Date:  2010-05-11       Impact factor: 3.169

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