Literature DB >> 17532505

Complete coding sequences and phylogenetic analysis of Human Bocavirus (HBoV).

Thaweesak Chieochansin1, Salin Chutinimitkul, Sunchai Payungporn, Thitikul Hiranras, Rujipat Samransamruajkit, Apiradee Theamboolers, Yong Poovorawan.   

Abstract

Human Bocavirus (HBoV) is a novel virus which can cause respiratory tract disease in infants or children. Recently, the prevalence of this virus has been studied worldwide. In this study, 18 of 252 (7.14%) nasopharyngeal suctions from infants or children between 1 month and 9 years of age with respiratory tract illness were HBoV-positive by PCR. Three positive samples were selected for sequencing the entire coding sequences using a new conserved set of primers. The results showed that the most conserved regions of HBoV are the NS1 and NP1 genes, whereas VP1 and VP2 showed frequent variations. However, the complete coding sequences showed that the variations did not depend on the origin of virus found. The complete coding sequences determined in this study can resolve the problem of an HBoV detection method, which can be advantageously implemented in laboratory detection.

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Year:  2007        PMID: 17532505     DOI: 10.1016/j.virusres.2007.04.022

Source DB:  PubMed          Journal:  Virus Res        ISSN: 0168-1702            Impact factor:   3.303


  26 in total

1.  Detection of human bocavirus 3 in China.

Authors:  Y Wang; R Gonzalez; H Zhou; J Li; Y Li; G Paranhos-Baccalà; G Vernet; L Guo; J Wang
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2011-02-01       Impact factor: 3.267

2.  Characterization of novel canine bocaviruses and their association with respiratory disease.

Authors:  Amit Kapoor; Natasha Mehta; Edward J Dubovi; Peter Simmonds; Lakshmanan Govindasamy; Jan L Medina; Craig Street; Shelly Shields; W Ian Lipkin
Journal:  J Gen Virol       Date:  2011-10-26       Impact factor: 3.891

3.  Complete genomes of three human bocavirus strains from children with gastroenteritis and respiratory tract illnesses in Jiangsu, China.

Authors:  Xiaochun Wang; Xiaodan Zhang; Hua Tian; Feng Ling; Min Yu; Guangming Sun; Shixing Yang; Quan Shen; Yan Wang; Shihe Shao; Wen Zhang
Journal:  J Virol       Date:  2012-12       Impact factor: 5.103

4.  Determining Persistence of Bocavirus DNA in the Respiratory Tract of Children by Pyrosequencing.

Authors:  Johana Castro Wagner; Richard B Pyles; Aaron L Miller; J Nokso-Koivisto; Michael J Loeffelholz; Tasnee Chonmaitree
Journal:  Pediatr Infect Dis J       Date:  2016-05       Impact factor: 2.129

5.  Human bocaviruses are highly diverse, dispersed, recombination prone, and prevalent in enteric infections.

Authors:  Amit Kapoor; Peter Simmonds; Elizabeth Slikas; Linlin Li; Ladaporn Bodhidatta; Orntipa Sethabutr; Henda Triki; Olfa Bahri; Bamidele S Oderinde; Marycelin M Baba; David N Bukbuk; John Besser; Joanne Bartkus; Eric Delwart
Journal:  J Infect Dis       Date:  2010-06-01       Impact factor: 5.226

6.  Bocavirus episome in infected human tissue contains non-identical termini.

Authors:  Amit Kapoor; Mady Hornig; Aravind Asokan; Brent Williams; Jose A Henriquez; W Ian Lipkin
Journal:  PLoS One       Date:  2011-06-28       Impact factor: 3.240

7.  Whole-genome sequencing analysis of human bocavirus detected in South Korea.

Authors:  L H Kang; Y J Won; A R Lee; S G Lee; H G Cho; Y J Park; J I Han; S Y Paik
Journal:  Epidemiol Infect       Date:  2018-03-14       Impact factor: 4.434

8.  A novel bocavirus associated with acute gastroenteritis in Australian children.

Authors:  Jane L Arthur; Geoffrey D Higgins; Geoffrey P Davidson; Rodney C Givney; Rodney M Ratcliff
Journal:  PLoS Pathog       Date:  2009-04-17       Impact factor: 6.823

9.  Human bocaviruses are not significantly associated with gastroenteritis: results of retesting archive DNA from a case control study in the UK.

Authors:  Sameena Nawaz; David J Allen; Farah Aladin; Christopher Gallimore; Miren Iturriza-Gómara
Journal:  PLoS One       Date:  2012-07-24       Impact factor: 3.240

10.  Bocavirus Infection in Otherwise Healthy Children with Respiratory Disease.

Authors:  Nicola Principi; Antonio Piralla; Alberto Zampiero; Sonia Bianchini; Giulia Umbrello; Alessia Scala; Samantha Bosis; Emilio Fossali; Fausto Baldanti; Susanna Esposito
Journal:  PLoS One       Date:  2015-08-12       Impact factor: 3.240

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