Literature DB >> 17531228

Automated cryoelectron microscopy of "single particles" applied to the 26S proteasome.

Stephan Nickell1, Florian Beck, Andreas Korinek, Oana Mihalache, Wolfgang Baumeister, Jürgen M Plitzko.   

Abstract

The 26S proteasome is a large molecular machine with a central role in intracellular protein degradation in eukaryotes. The 2.5 MDa complex, which is built from two copies each of more than 30 different subunits, is labile and prone to dissociation into subcomplexes. Hence it is difficult if not impossible, to obtain structurally homogeneous preparations and, as a consequence, it is very cumbersome to obtain large numbers of images of the holocomplex. In this communication, we describe an automated procedure for the acquisition of large data sets of cryoelectron micrographs. The application of this procedure to the 26S proteasome from Drosophila has allowed us to determine the three-dimensional structure of the complex to a resolution of 2.9 nm and the prospects for further improvements are good.

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Year:  2007        PMID: 17531228     DOI: 10.1016/j.febslet.2007.05.028

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  12 in total

1.  Blotting protein complexes from native gels to electron microscopy grids.

Authors:  Roland Wilhelm Knispel; Christine Kofler; Marius Boicu; Wolfgang Baumeister; Stephan Nickell
Journal:  Nat Methods       Date:  2012-01-08       Impact factor: 28.547

2.  Toward an integrated structural model of the 26S proteasome.

Authors:  Friedrich Förster; Keren Lasker; Stephan Nickell; Andrej Sali; Wolfgang Baumeister
Journal:  Mol Cell Proteomics       Date:  2010-05-13       Impact factor: 5.911

3.  Osmotic stress inhibits proteasome by p38 MAPK-dependent phosphorylation.

Authors:  Seung-Hoon Lee; Yoon Park; Sungjoo Kim Yoon; Jong-Bok Yoon
Journal:  J Biol Chem       Date:  2010-11-02       Impact factor: 5.157

4.  Image processing for electron microscopy single-particle analysis using XMIPP.

Authors:  Sjors H W Scheres; Rafael Núñez-Ramírez; Carlos O S Sorzano; José María Carazo; Roberto Marabini
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

5.  Insights into the molecular architecture of the 26S proteasome.

Authors:  Stephan Nickell; Florian Beck; Sjors H W Scheres; Andreas Korinek; Friedrich Förster; Keren Lasker; Oana Mihalache; Na Sun; István Nagy; Andrej Sali; Jürgen M Plitzko; Jose-Maria Carazo; Matthias Mann; Wolfgang Baumeister
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-06       Impact factor: 11.205

6.  Maximum likelihood refinement of electron microscopy data with normalization errors.

Authors:  Sjors H W Scheres; Mikel Valle; Patricia Grob; Eva Nogales; José-María Carazo
Journal:  J Struct Biol       Date:  2009-02-21       Impact factor: 2.867

Review 7.  The proteasome under the microscope: the regulatory particle in focus.

Authors:  Gabriel C Lander; Andreas Martin; Eva Nogales
Journal:  Curr Opin Struct Biol       Date:  2013-03-13       Impact factor: 6.809

8.  Introducing robustness to maximum-likelihood refinement of electron-microscopy data.

Authors:  Sjors H W Scheres; José María Carazo
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-06-20

Review 9.  Toward an atomic model of the 26S proteasome.

Authors:  Yifan Cheng
Journal:  Curr Opin Struct Biol       Date:  2009-03-14       Impact factor: 6.809

Review 10.  Recognition and processing of ubiquitin-protein conjugates by the proteasome.

Authors:  Daniel Finley
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

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