Literature DB >> 17521658

Evaluation of individual particle capillary electrophoresis experiments via quantile analysis.

Christofer E Whiting1, Edgar A Arriaga.   

Abstract

The number of particles in a sample heavily influences the shape of a distribution corresponding to the individual particle measurements. Selecting an adequate number of particles that prevents biases due to sample size is particularly difficult for complex biological systems in which statistical distributions are not normal. Quantile analysis is a powerful statistical technique that can rapidly compare differences between multiple distributions of individual particles. This report utilizes quantile analysis to show that the number of events detected affects the mobility distributions for rat liver and mouse liver mitochondria, sample individual particles, when analyzed via capillary electrophoresis with laser-induced fluorescence. When the mitochondrial sample is small (e.g. <78), there are not enough events to obtain statistically relevant mobility data. Adsorption to the capillary surface also significantly affects the mobility distribution at a small number of events in uncoated and dynamically coated capillaries. These adsorption effects can be overcome when the mitochondrial load on the capillary is sufficiently large (i.e. >609 and >1426 events for mouse liver on uncoated capillaries and rat liver on dynamically coated capillaries, respectively). It is anticipated that quantile analysis can be used to study other distributions of individual particles, such as nanoparticles, organelles, and biomolecules, and that distributions of these particles will also be dependent on sample size.

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Year:  2007        PMID: 17521658      PMCID: PMC2504414          DOI: 10.1016/j.chroma.2007.04.065

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  26 in total

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Authors:  H M Shapiro
Journal:  Methods       Date:  2000-07       Impact factor: 3.608

2.  Analysis of individual acidic organelles by capillary electrophoresis with laser-induced fluorescence detection facilitated by the endocytosis of fluorescently labeled microspheres.

Authors:  Kathryn M Fuller; Edgar A Arriaga
Journal:  Anal Chem       Date:  2003-05-01       Impact factor: 6.986

3.  Capillary electrophoresis monitors changes in the electrophoretic behavior of mitochondrial preparations.

Authors:  Kathryn M Fuller; Edgar A Arriaga
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2004-07-05       Impact factor: 3.205

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Authors:  Leopold Kremser; Dieter Blaas; Ernst Kenndler
Journal:  Electrophoresis       Date:  2004-07       Impact factor: 3.535

5.  CE-LIF analysis of mitochondria using uncoated and dynamically coated capillaries.

Authors:  Christofer E Whiting; Edgar A Arriaga
Journal:  Electrophoresis       Date:  2006-11       Impact factor: 3.535

Review 6.  Chemical microscopy applied to biological systems.

Authors:  Marian Navratil; Gary A Mabbott; Edgar A Arriaga
Journal:  Anal Chem       Date:  2006-06-15       Impact factor: 6.986

7.  Liposome behavior in capillary electrophoresis.

Authors:  M A Roberts; L Locascio-Brown; W A Maccrehan; R A Durst
Journal:  Anal Chem       Date:  1996-10-01       Impact factor: 6.986

8.  A digitonin-based procedure for the isolation of mitochondrial DNA from mammalian cells.

Authors:  N Howell; M S Nalty; J Appel
Journal:  Plasmid       Date:  1986-07       Impact factor: 3.466

9.  Determination of electrophoretic mobility distributions through the analysis of individual mitochondrial events by capillary electrophoresis with laser-induced fluorescence detection.

Authors:  Ciarán F Duffy; Kathryn M Fuller; Megan W Malvey; Richard O'Kennedy; Edgar A Arriaga
Journal:  Anal Chem       Date:  2002-01-01       Impact factor: 6.986

10.  Surface modification based on Si-O and Si-C sublayers and a series of N-substituted acrylamide top-layers for capillary electrophoresis.

Authors:  C Gelfi; M Curcio; P G Righetti; R Sebastiano; A Citterio; H Ahmadzadeh; N J Dovichi
Journal:  Electrophoresis       Date:  1998-07       Impact factor: 3.535

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  11 in total

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Authors:  Gregory G Wolken; Vratislav Kostal; Edgar A Arriaga
Journal:  Anal Chem       Date:  2010-12-30       Impact factor: 6.986

Review 2.  Recent advances in the analysis of biological particles by capillary electrophoresis.

Authors:  Vratislav Kostal; Edgar A Arriaga
Journal:  Electrophoresis       Date:  2008-06       Impact factor: 3.535

3.  Determining under- and oversampling of individual particle distributions in microfluidic electrophoresis with orthogonal laser-induced fluorescence detection.

Authors:  Christofer E Whiting; Rajat A Dua; Ciarán F Duffy; Edgar A Arriaga
Journal:  Electrophoresis       Date:  2008-04       Impact factor: 3.535

4.  Individual organelle pH determinations of magnetically enriched endocytic organelles via laser-induced fluorescence detection.

Authors:  Chad P Satori; Vratislav Kostal; Edgar A Arriaga
Journal:  Anal Chem       Date:  2011-09-12       Impact factor: 6.986

5.  Capillary electrophoretic analysis reveals subcellular binding between individual mitochondria and cytoskeleton.

Authors:  Vratislav Kostal; Edgar A Arriaga
Journal:  Anal Chem       Date:  2011-02-10       Impact factor: 6.986

6.  Fast determination of mitochondria electrophoretic mobility using micro free-flow electrophoresis.

Authors:  Vratislav Kostal; Bryan R Fonslow; Edgar A Arriaga; Michael T Bowser
Journal:  Anal Chem       Date:  2009-11-15       Impact factor: 6.986

7.  Evaluation of peak overlap in migration-time distributions determined by organelle capillary electrophoresis: Type-II error analogy based on statistical-overlap theory.

Authors:  Joe M Davis; Edgar A Arriaga
Journal:  J Chromatogr A       Date:  2009-07-07       Impact factor: 4.759

8.  Hybrid capillary-microfluidic device for the separation, lysis, and electrochemical detection of vesicles.

Authors:  Donna M Omiatek; Michael F Santillo; Michael L Heien; Andrew G Ewing
Journal:  Anal Chem       Date:  2009-03-15       Impact factor: 6.986

9.  Estimation of migration-time and mobility distributions in organelle capillary electrophoresis with statistical-overlap theory.

Authors:  Joe M Davis; Edgar A Arriaga
Journal:  Anal Chem       Date:  2010-01-01       Impact factor: 6.986

10.  Simultaneous measurement of individual mitochondrial membrane potential and electrophoretic mobility by capillary electrophoresis.

Authors:  Gregory G Wolken; Edgar A Arriaga
Journal:  Anal Chem       Date:  2014-04-18       Impact factor: 6.986

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