Literature DB >> 17517893

Rotational catalysis of Escherichia coli ATP synthase F1 sector. Stochastic fluctuation and a key domain of the beta subunit.

Mayumi Nakanishi-Matsui1, Sachiko Kashiwagi, Toshiharu Ubukata, Atsuko Iwamoto-Kihara, Yoh Wada, Masamitsu Futai.   

Abstract

A complex of gamma, epsilon, and c subunits rotates in ATP synthase (FoF(1)) coupled with proton transport. A gold bead connected to the gamma subunit of the Escherichia coli F(1) sector exhibited stochastic rotation, confirming a previous study (Nakanishi-Matsui, M., Kashiwagi, S., Hosokawa, H., Cipriano, D. J., Dunn, S. D., Wada, Y., and Futai, M. (2006) J. Biol. Chem. 281, 4126-4131). A similar approach was taken for mutations in the beta subunit key region; consistent with its bulk phase ATPase activities, F(1) with the Ser-174 to Phe substitution (betaS174F) exhibited a slower single revolution time (time required for 360 degree revolution) and paused almost 10 times longer than the wild type at one of the three 120 degrees positions during the stepped revolution. The pause positions were probably not at the "ATP waiting" dwell but at the "ATP hydrolysis/product release" dwell, since the ATP concentration used for the assay was approximately 30-fold higher than the K(m) value for ATP. A betaGly-149 to Ala substitution in the phosphate binding P-loop suppressed the defect of betaS174F. The revertant (betaG149A/betaS174F) exhibited similar rotation to the wild type, except that it showed long pauses less frequently. Essentially the same results were obtained with the Ser-174 to Leu substitution and the corresponding revertant betaG149A/betaS174L. These results indicate that the domain between beta-sheet 4 (betaSer-174) and P-loop (betaGly-149) is important to drive rotation.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17517893     DOI: 10.1074/jbc.M700551200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Single molecule behavior of inhibited and active states of Escherichia coli ATP synthase F1 rotation.

Authors:  Mizuki Sekiya; Hiroyuki Hosokawa; Mayumi Nakanishi-Matsui; Marwan K Al-Shawi; Robert K Nakamoto; Masamitsu Futai
Journal:  J Biol Chem       Date:  2010-10-25       Impact factor: 5.157

2.  Temperature dependence of single molecule rotation of the Escherichia coli ATP synthase F1 sector reveals the importance of gamma-beta subunit interactions in the catalytic dwell.

Authors:  Mizuki Sekiya; Robert K Nakamoto; Marwan K Al-Shawi; Mayumi Nakanishi-Matsui; Masamitsu Futai
Journal:  J Biol Chem       Date:  2009-06-05       Impact factor: 5.157

3.  High-resolution single-molecule characterization of the enzymatic states in Escherichia coli F1-ATPase.

Authors:  Thomas Bilyard; Mayumi Nakanishi-Matsui; Bradley C Steel; Teuta Pilizota; Ashley L Nord; Hiroyuki Hosokawa; Masamitsu Futai; Richard M Berry
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-12-24       Impact factor: 6.237

4.  F1-ATPase of Escherichia coli: the ε- inhibited state forms after ATP hydrolysis, is distinct from the ADP-inhibited state, and responds dynamically to catalytic site ligands.

Authors:  Naman B Shah; Marcus L Hutcheon; Brian K Haarer; Thomas M Duncan
Journal:  J Biol Chem       Date:  2013-02-11       Impact factor: 5.157

5.  Binding of phytopolyphenol piceatannol disrupts β/γ subunit interactions and rate-limiting step of steady-state rotational catalysis in Escherichia coli F1-ATPase.

Authors:  Mizuki Sekiya; Robert K Nakamoto; Mayumi Nakanishi-Matsui; Masamitsu Futai
Journal:  J Biol Chem       Date:  2012-05-11       Impact factor: 5.157

Review 6.  The regulatory subunit ε in Escherichia coli FOF1-ATP synthase.

Authors:  Hendrik Sielaff; Thomas M Duncan; Michael Börsch
Journal:  Biochim Biophys Acta Bioenerg       Date:  2018-06-20       Impact factor: 3.991

7.  Inhibition of F1-ATPase rotational catalysis by the carboxyl-terminal domain of the ϵ subunit.

Authors:  Mayumi Nakanishi-Matsui; Mizuki Sekiya; Shio Yano; Masamitsu Futai
Journal:  J Biol Chem       Date:  2014-09-16       Impact factor: 5.157

8.  Single-molecule analysis reveals rotational substeps and chemo-mechanical coupling scheme of Enterococcus hirae V1-ATPase.

Authors:  Tatsuya Iida; Yoshihiro Minagawa; Hiroshi Ueno; Fumihiro Kawai; Takeshi Murata; Ryota Iino
Journal:  J Biol Chem       Date:  2019-09-13       Impact factor: 5.157

9.  New structural and functional defects in polyphosphate deficient bacteria: a cellular and proteomic study.

Authors:  Cristian Varela; Cecilia Mauriaca; Alberto Paradela; Juan P Albar; Carlos A Jerez; Francisco P Chávez
Journal:  BMC Microbiol       Date:  2010-01-12       Impact factor: 3.605

Review 10.  The V-type H+-ATPase in vesicular trafficking: targeting, regulation and function.

Authors:  Vladimir Marshansky; Masamitsu Futai
Journal:  Curr Opin Cell Biol       Date:  2008-05-27       Impact factor: 8.382

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.