Literature DB >> 19502237

Temperature dependence of single molecule rotation of the Escherichia coli ATP synthase F1 sector reveals the importance of gamma-beta subunit interactions in the catalytic dwell.

Mizuki Sekiya1, Robert K Nakamoto, Marwan K Al-Shawi, Mayumi Nakanishi-Matsui, Masamitsu Futai.   

Abstract

The temperature-dependent rotation of F1-ATPase gamma subunit was observed in V(max) conditions at low viscous drag using a 60-nm gold bead (Nakanishi-Matsui, M., Kashiwagi, S., Hosokawa, H., Cipriano, D. J., Dunn, S. D., Wada, Y., and Futai, M. (2006) J. Biol. Chem. 281, 4126-4131). The Arrhenius slopes of the speed of the individual 120 degrees steps and reciprocal of the pause length between rotation steps were very similar, indicating a flat energy pathway followed by the rotationally coupled catalytic cycle. In contrast, the Arrhenius slope of the reciprocal pause length of the gammaM23K mutant F1 was significantly increased, whereas that of the rotation rate was similar to wild type. The effects of the rotor gammaM23K substitution and the counteracting effects of betaE381D mutation in the interacting stator subunits demonstrate that the rotor-stator interactions play critical roles in the utilization of stored elastic energy. The gammaM23K enzyme must overcome an abrupt activation energy barrier, forcing it onto a less favored pathway that results in uncoupling catalysis from rotation.

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Year:  2009        PMID: 19502237      PMCID: PMC2755962          DOI: 10.1074/jbc.M109.009019

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  44 in total

1.  Rotation of a complex of the gamma subunit and c ring of Escherichia coli ATP synthase. The rotor and stator are interchangeable.

Authors:  M Tanabe; K Nishio; Y Iko; Y Sambongi; A Iwamoto-Kihara; Y Wada; M Futai
Journal:  J Biol Chem       Date:  2001-02-13       Impact factor: 5.157

2.  Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase.

Authors:  R Yasuda; H Noji; M Yoshida; K Kinosita; H Itoh
Journal:  Nature       Date:  2001-04-19       Impact factor: 49.962

Review 3.  The rotary mechanism of ATP synthase.

Authors:  D Stock; C Gibbons; I Arechaga; A G Leslie; J E Walker
Journal:  Curr Opin Struct Biol       Date:  2000-12       Impact factor: 6.809

4.  A proton pump ATPase with testis-specific E1-subunit isoform required for acrosome acidification.

Authors:  Ge-Hong Sun-Wada; Yoko Imai-Senga; Akitsugu Yamamoto; Yoshiko Murata; Tomoyuki Hirata; Yoh Wada; Masamitsu Futai
Journal:  J Biol Chem       Date:  2002-02-28       Impact factor: 5.157

5.  Catalysis and rotation of F1 motor: cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation.

Authors:  Katsuya Shimabukuro; Ryohei Yasuda; Eiro Muneyuki; Kiyotaka Y Hara; Kazuhiko Kinosita; Masasuke Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-01       Impact factor: 11.205

6.  Mechanically driven ATP synthesis by F1-ATPase.

Authors:  Hiroyasu Itoh; Akira Takahashi; Kengo Adachi; Hiroyuki Noji; Ryohei Yasuda; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Nature       Date:  2004-01-29       Impact factor: 49.962

Review 7.  Mechanics of coupling proton movements to c-ring rotation in ATP synthase.

Authors:  Robert H Fillingame; Christine M Angevine; Oleg Y Dmitriev
Journal:  FEBS Lett       Date:  2003-11-27       Impact factor: 4.124

8.  Subunit rotation of ATP synthase embedded in membranes: a or beta subunit rotation relative to the c subunit ring.

Authors:  Kazuaki Nishio; Atsuko Iwamoto-Kihara; Akitsugu Yamamoto; Yoh Wada; Masamitsu Futai
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-30       Impact factor: 11.205

9.  Mechanical rotation of the c subunit oligomer in ATP synthase (F0F1): direct observation.

Authors:  Y Sambongi; Y Iko; M Tanabe; H Omote; A Iwamoto-Kihara; I Ueda; T Yanagida; Y Wada; M Futai
Journal:  Science       Date:  1999-11-26       Impact factor: 47.728

10.  ATP synthase F(1) sector rotation. Defective torque generation in the beta subunit Ser-174 to Phe mutant and its suppression by second mutations.

Authors:  Y Iko; Y Sambongi; M Tanabe; A Iwamoto-Kihara; K Saito; I Ueda; Y Wada; M Futai
Journal:  J Biol Chem       Date:  2001-10-05       Impact factor: 5.157

View more
  10 in total

1.  Single molecule behavior of inhibited and active states of Escherichia coli ATP synthase F1 rotation.

Authors:  Mizuki Sekiya; Hiroyuki Hosokawa; Mayumi Nakanishi-Matsui; Marwan K Al-Shawi; Robert K Nakamoto; Masamitsu Futai
Journal:  J Biol Chem       Date:  2010-10-25       Impact factor: 5.157

2.  High-resolution single-molecule characterization of the enzymatic states in Escherichia coli F1-ATPase.

Authors:  Thomas Bilyard; Mayumi Nakanishi-Matsui; Bradley C Steel; Teuta Pilizota; Ashley L Nord; Hiroyuki Hosokawa; Masamitsu Futai; Richard M Berry
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-12-24       Impact factor: 6.237

Review 3.  Twisting and subunit rotation in single F(O)(F1)-ATP synthase.

Authors:  Hendrik Sielaff; Michael Börsch
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-12-24       Impact factor: 6.237

4.  Thermodynamic analysis of F1-ATPase rotary catalysis using high-speed imaging.

Authors:  Rikiya Watanabe; Yoshihiro Minagawa; Hiroyuki Noji
Journal:  Protein Sci       Date:  2014-10-21       Impact factor: 6.725

5.  A microfluidic approach for investigating the temperature dependence of biomolecular activity with single-molecule resolution.

Authors:  Bin Wang; Joseph Ho; Jingyi Fei; Ruben L Gonzalez; Qiao Lin
Journal:  Lab Chip       Date:  2010-10-27       Impact factor: 6.799

Review 6.  F1F0-ATP synthases of alkaliphilic bacteria: lessons from their adaptations.

Authors:  David B Hicks; Jun Liu; Makoto Fujisawa; Terry A Krulwich
Journal:  Biochim Biophys Acta       Date:  2010-03-01

7.  Interaction between γC87 and γR242 residues participates in energy coupling between catalysis and proton translocation in Escherichia coli ATP synthase.

Authors:  Yunxiang Li; Xinyou Ma; Joachim Weber
Journal:  Biochim Biophys Acta Bioenerg       Date:  2019-06-25       Impact factor: 3.991

8.  Binding of phytopolyphenol piceatannol disrupts β/γ subunit interactions and rate-limiting step of steady-state rotational catalysis in Escherichia coli F1-ATPase.

Authors:  Mizuki Sekiya; Robert K Nakamoto; Mayumi Nakanishi-Matsui; Masamitsu Futai
Journal:  J Biol Chem       Date:  2012-05-11       Impact factor: 5.157

9.  Inhibition of F1-ATPase rotational catalysis by the carboxyl-terminal domain of the ϵ subunit.

Authors:  Mayumi Nakanishi-Matsui; Mizuki Sekiya; Shio Yano; Masamitsu Futai
Journal:  J Biol Chem       Date:  2014-09-16       Impact factor: 5.157

10.  Rotary catalysis of bovine mitochondrial F1-ATPase studied by single-molecule experiments.

Authors:  Ryohei Kobayashi; Hiroshi Ueno; Chun-Biu Li; Hiroyuki Noji
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-02       Impact factor: 11.205

  10 in total

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