Literature DB >> 17515910

Decoding global gene expression programs in liver cancer by noninvasive imaging.

Eran Segal1, Claude B Sirlin, Clara Ooi, Adam S Adler, Jeremy Gollub, Xin Chen, Bryan K Chan, George R Matcuk, Christopher T Barry, Howard Y Chang, Michael D Kuo.   

Abstract

Paralleling the diversity of genetic and protein activities, pathologic human tissues also exhibit diverse radiographic features. Here we show that dynamic imaging traits in non-invasive computed tomography (CT) systematically correlate with the global gene expression programs of primary human liver cancer. Combinations of twenty-eight imaging traits can reconstruct 78% of the global gene expression profiles, revealing cell proliferation, liver synthetic function, and patient prognosis. Thus, genomic activity of human liver cancers can be decoded by noninvasive imaging, thereby enabling noninvasive, serial and frequent molecular profiling for personalized medicine.

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Year:  2007        PMID: 17515910     DOI: 10.1038/nbt1306

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  224 in total

1.  Drug discovery in a multidimensional world: systems, patterns, and networks.

Authors:  Joel T Dudley; Eric Schadt; Marina Sirota; Atul J Butte; Euan Ashley
Journal:  J Cardiovasc Transl Res       Date:  2010-07-31       Impact factor: 4.132

2.  Non-small cell lung cancer: identifying prognostic imaging biomarkers by leveraging public gene expression microarray data--methods and preliminary results.

Authors:  Olivier Gevaert; Jiajing Xu; Chuong D Hoang; Ann N Leung; Yue Xu; Andrew Quon; Daniel L Rubin; Sandy Napel; Sylvia K Plevritis
Journal:  Radiology       Date:  2012-06-21       Impact factor: 11.105

3.  Image-Guided Biopsy in the Era of Personalized Cancer Care: Proceedings from the Society of Interventional Radiology Research Consensus Panel.

Authors:  Alda L Tam; Howard J Lim; Ignacio I Wistuba; Anobel Tamrazi; Michael D Kuo; Etay Ziv; Stephen Wong; Albert J Shih; Robert J Webster; Gregory S Fischer; Sunitha Nagrath; Suzanne E Davis; Sarah B White; Kamran Ahrar
Journal:  J Vasc Interv Radiol       Date:  2015-11-25       Impact factor: 3.464

4.  Special Section Guest Editorial:Radiomics and Imaging Genomics: Quantitative Imaging for Precision Medicine.

Authors:  Sandy Napel; Maryellen Giger
Journal:  J Med Imaging (Bellingham)       Date:  2015-12-11

Review 5.  Image-based biomarkers for solid tumor quantification.

Authors:  Peter Savadjiev; Jaron Chong; Anthony Dohan; Vincent Agnus; Reza Forghani; Caroline Reinhold; Benoit Gallix
Journal:  Eur Radiol       Date:  2019-04-08       Impact factor: 5.315

6.  Radiomics of high-grade serous ovarian cancer: association between quantitative CT features, residual tumour and disease progression within 12 months.

Authors:  Stefania Rizzo; Francesca Botta; Sara Raimondi; Daniela Origgi; Valentina Buscarino; Anna Colarieti; Federica Tomao; Giovanni Aletti; Vanna Zanagnolo; Maria Del Grande; Nicoletta Colombo; Massimo Bellomi
Journal:  Eur Radiol       Date:  2018-05-08       Impact factor: 5.315

7.  Short-term reproducibility of radiomic features in liver parenchyma and liver malignancies on contrast-enhanced CT imaging.

Authors:  Thomas Perrin; Abhishek Midya; Rikiya Yamashita; Jayasree Chakraborty; Tome Saidon; William R Jarnagin; Mithat Gonen; Amber L Simpson; Richard K G Do
Journal:  Abdom Radiol (NY)       Date:  2018-12

8.  Antiangiogenic therapy for primary liver cancer: correlation of changes in dynamic contrast-enhanced magnetic resonance imaging with tissue hypoxia markers and clinical response.

Authors:  Adam C Yopp; Lawrence H Schwartz; Nancy Kemeny; David H Gultekin; Mithat Gönen; Zubin Bamboat; Jinru Shia; Dana Haviland; Michael I D'Angelica; Yuman Fong; Ronald P DeMatteo; Peter J Allen; William R Jarnagin
Journal:  Ann Surg Oncol       Date:  2011-02-01       Impact factor: 5.344

9.  Reproducibility and Prognosis of Quantitative Features Extracted from CT Images.

Authors:  Yoganand Balagurunathan; Yuhua Gu; Hua Wang; Virendra Kumar; Olya Grove; Sam Hawkins; Jongphil Kim; Dmitry B Goldgof; Lawrence O Hall; Robert A Gatenby; Robert J Gillies
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

10.  Radiologically defined ecological dynamics and clinical outcomes in glioblastoma multiforme: preliminary results.

Authors:  Mu Zhou; Lawrence Hall; Dmitry Goldgof; Robin Russo; Yoganand Balagurunathan; Robert Gillies; Robert Gatenby
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

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