Literature DB >> 17504484

Assessing diversity and biogeography of aerobic anoxygenic phototrophic bacteria in surface waters of the Atlantic and Pacific Oceans using the Global Ocean Sampling expedition metagenomes.

Natalya Yutin1, Marcelino T Suzuki, Hanno Teeling, Marc Weber, J Craig Venter, Douglas B Rusch, Oded Béjà.   

Abstract

Aerobic anoxygenic photosynthetic bacteria (AAnP) were recently proposed to be significant contributors to global oceanic carbon and energy cycles. However, AAnP abundance, spatial distribution, diversity and potential ecological importance remain poorly understood. Here we present metagenomic data from the Global Ocean Sampling expedition indicating that AAnP diversity and abundance vary in different oceanic regions. Furthermore, we show for the first time that the composition of AAnP assemblages change between different oceanic regions, with specific bacterial assemblages adapted to open ocean or coastal areas respectively. Our results support the notion that marine AAnP populations are complex and dynamic, and compose an important fraction of bacterioplankton assemblages in certain oceanic areas.

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Year:  2007        PMID: 17504484     DOI: 10.1111/j.1462-2920.2007.01265.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  59 in total

1.  Phylogenetic analysis suggests that habitat filtering is structuring marine bacterial communities across the globe.

Authors:  Mikael Pontarp; Björn Canbäck; Anders Tunlid; Per Lundberg
Journal:  Microb Ecol       Date:  2012-07       Impact factor: 4.552

2.  Abundance and genetic diversity of aerobic anoxygenic phototrophic bacteria of coastal regions of the pacific ocean.

Authors:  Anna E Ritchie; Zackary I Johnson
Journal:  Appl Environ Microbiol       Date:  2012-02-03       Impact factor: 4.792

Review 3.  Microbial Surface Colonization and Biofilm Development in Marine Environments.

Authors:  Hongyue Dang; Charles R Lovell
Journal:  Microbiol Mol Biol Rev       Date:  2015-12-23       Impact factor: 11.056

4.  Photoheterotrophic microbes in the Arctic Ocean in summer and winter.

Authors:  Matthew T Cottrell; David L Kirchman
Journal:  Appl Environ Microbiol       Date:  2009-06-05       Impact factor: 4.792

5.  Prokaryotic genomes and diversity in surface ocean waters: interrogating the global ocean sampling metagenome.

Authors:  Erin J Biers; Shulei Sun; Erinn C Howard
Journal:  Appl Environ Microbiol       Date:  2009-02-06       Impact factor: 4.792

Review 6.  Analytical tools and databases for metagenomics in the next-generation sequencing era.

Authors:  Mincheol Kim; Ki-Hyun Lee; Seok-Whan Yoon; Bong-Soo Kim; Jongsik Chun; Hana Yi
Journal:  Genomics Inform       Date:  2013-09-30

7.  GenGIS: A geospatial information system for genomic data.

Authors:  Donovan H Parks; Michael Porter; Sylvia Churcher; Suwen Wang; Christian Blouin; Jacqueline Whalley; Stephen Brooks; Robert G Beiko
Journal:  Genome Res       Date:  2009-07-27       Impact factor: 9.043

8.  Abundance, depth distribution, and composition of aerobic bacteriochlorophyll a-producing bacteria in four basins of the central Baltic Sea.

Authors:  Ivette Salka; Vladimíra Moulisová; Michal Koblízek; Günter Jost; Klaus Jürgens; Matthias Labrenz
Journal:  Appl Environ Microbiol       Date:  2008-05-23       Impact factor: 4.792

9.  Coexistence of two different photosynthetic operons in Citromicrobium bathyomarinum JL354 as revealed by whole-genome sequencing.

Authors:  Nianzhi Jiao; Rui Zhang; Qiang Zheng
Journal:  J Bacteriol       Date:  2009-12-04       Impact factor: 3.490

10.  Horizontal transfers of two types of puf operons among phototrophic members of the Roseobacter clade.

Authors:  Michal Koblížek; Vladimíra Moulisová; Markéta Muroňová; Miroslav Oborník
Journal:  Folia Microbiol (Praha)       Date:  2014-08-06       Impact factor: 2.099

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