Literature DB >> 17501386

Unfolding of proteins and long transient conformations detected by single nanopore recording.

G Oukhaled1, J Mathé, A-L Biance, L Bacri, J-M Betton, D Lairez, J Pelta, L Auvray.   

Abstract

We study the electrophoretic blockades due to entries of partially unfolded proteins into a nanopore as a function of the concentration of the denaturing agent. Short and long pore blockades are observed by electrical detection. Short blockades are due to the passage of completely unfolded proteins, their frequency increases as the concentration of the denaturing agent increases, following a sigmoidal denaturation curve. Long blockades reveal partially folded conformations. Their duration increases as the proteins are more folded. The observation of a Vogel-Fulcher law suggests a glassy behavior.

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Year:  2007        PMID: 17501386     DOI: 10.1103/PhysRevLett.98.158101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  74 in total

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Journal:  Biophys J       Date:  2012-01-03       Impact factor: 4.033

2.  DNA translocation and unzipping through a nanopore: some geometrical effects.

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Review 3.  Applications of biological pores in nanomedicine, sensing, and nanoelectronics.

Authors:  Sheereen Majd; Erik C Yusko; Yazan N Billeh; Michael X Macrae; Jerry Yang; Michael Mayer
Journal:  Curr Opin Biotechnol       Date:  2010-06-18       Impact factor: 9.740

4.  Full reconstruction of a vectorial protein folding pathway by atomic force microscopy and molecular dynamics simulations.

Authors:  Whasil Lee; Xiancheng Zeng; Huan-Xiang Zhou; Vann Bennett; Weitao Yang; Piotr E Marszalek
Journal:  J Biol Chem       Date:  2010-09-24       Impact factor: 5.157

5.  Deciphering ionic current signatures of DNA transport through a nanopore.

Authors:  Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2010-02-02       Impact factor: 7.790

6.  Temperature Effect on Ionic Current and ssDNA Transport through Nanopores.

Authors:  Linda Payet; Marlène Martinho; Céline Merstorf; Manuela Pastoriza-Gallego; Juan Pelta; Virgile Viasnoff; Loïc Auvray; Murugappan Muthukumar; Jérôme Mathé
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

7.  Fingerprinting of Peptides with a Large Channel of Bacteriophage Phi29 DNA Packaging Motor.

Authors:  Zhouxiang Ji; Shaoying Wang; Zhengyi Zhao; Zhi Zhou; Farzin Haque; Peixuan Guo
Journal:  Small       Date:  2016-07-20       Impact factor: 13.281

8.  Binding of bovine T194A PrP(C) by PrP(Sc)-specific antibodies: potential implications for immunotherapy of familial prion diseases.

Authors:  Claudia A Madampage; Pekka Määttänen; Kristen Marciniuk; Robert Brownlie; Olga Andrievskaia; Andrew Potter; Neil R Cashman; Jeremy S Lee; Scott Napper
Journal:  Prion       Date:  2013-05-31       Impact factor: 3.931

9.  Electrostatic Control of Polymer Translocation Speed through α‑Hemolysin Protein Pore.

Authors:  Byoung-Jin Jeon; Murugappan Muthukumar
Journal:  Macromolecules       Date:  2016-11-22       Impact factor: 5.985

10.  Excursion of a single polypeptide into a protein pore: simple physics, but complicated biology.

Authors:  Mohammad M Mohammad; Liviu Movileanu
Journal:  Eur Biophys J       Date:  2008-03-27       Impact factor: 1.733

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