Literature DB >> 17501165

Confined space and effective interactions of multiple self-avoiding chains.

Suckjoon Jun1, Axel Arnold, Bae-Yeun Ha.   

Abstract

We study the link between three seeming-disparate cases of self-avoiding polymers: strongly overlapping multiple chains in dilute solution, chains under spherical confinement, and the onset of semidilute solutions. Our main result is that the free energy for overlapping n chains is independent of chain length and scales as n9/4, slowly crossing over to n3, as n increases. For strongly confined polymers inside a spherical cavity, we show that rearranging the chains does not cost an additional free energy. Our results imply that, during cell cycle, global reorganization of eukaryotic chromosomes in a large cell nucleus could be readily achieved.

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Year:  2007        PMID: 17501165     DOI: 10.1103/PhysRevLett.98.128303

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  7 in total

1.  Fluctuation modes of nanoconfined DNA.

Authors:  Alena Karpusenko; Joshua H Carpenter; Chunda Zhou; Shuang Fang Lim; Junhan Pan; Robert Riehn
Journal:  J Appl Phys       Date:  2012-01-17       Impact factor: 2.546

2.  A Lamin-Associated Chromatin Model for Chromosome Organization.

Authors:  Ajoy Maji; Jahir A Ahmed; Subhankar Roy; Buddhapriya Chakrabarti; Mithun K Mitra
Journal:  Biophys J       Date:  2020-05-20       Impact factor: 4.033

3.  Distribution of DNA-condensing protein complexes in the adenovirus core.

Authors:  Ana J Pérez-Berná; Sanjin Marion; F Javier Chichón; José J Fernández; Dennis C Winkler; José L Carrascosa; Alasdair C Steven; Antonio Šiber; Carmen San Martín
Journal:  Nucleic Acids Res       Date:  2015-03-27       Impact factor: 16.971

4.  Arm retraction and escape transition in semi-flexible star polymer under cylindrical confinement.

Authors:  Dušan Račko; Peter Cifra
Journal:  J Mol Model       Date:  2015-07-04       Impact factor: 1.810

Review 5.  Entropy as the driver of chromosome segregation.

Authors:  Suckjoon Jun; Andrew Wright
Journal:  Nat Rev Microbiol       Date:  2010-08       Impact factor: 60.633

6.  Polymer translocation through a cylindrical channel.

Authors:  Chiu Tai Andrew Wong; M Muthukumar
Journal:  J Chem Phys       Date:  2008-04-21       Impact factor: 3.488

7.  Chromosome driven spatial patterning of proteins in bacteria.

Authors:  Saeed Saberi; Eldon Emberly
Journal:  PLoS Comput Biol       Date:  2010-11-11       Impact factor: 4.475

  7 in total

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