Literature DB >> 17498745

Telomeric nucleosomes are intrinsically mobile.

Sabrina Pisano1, Enrico Marchioni, Alessandra Galati, Rosella Mechelli, Maria Savino, Stefano Cacchione.   

Abstract

Nucleosomes are no longer considered only static basic units that package eukaryotic DNA but they emerge as dynamic players in all chromosomal processes. Regulatory proteins can gain access to recognition sequences hidden by the histone octamer through the action of ATP-dependent chromatin remodeling complexes that cause nucleosome sliding. In addition, it is known that nucleosomes are able to spontaneously reposition along the DNA due to intrinsic dynamic properties, but it is not clear yet to what extent sequence-dependent dynamic properties contribute to nucleosome repositioning. Here, we study mobility of nucleosomes formed on telomeric sequences as a function of temperature and ionic strength. We find that telomeric nucleosomes are highly intrinsically mobile under physiological conditions, whereas nucleosomes formed on an average DNA sequence mostly remain in the initial position. This indicates that DNA sequence affects not only the thermodynamic stability and the positioning of nucleosomes but also their dynamic properties. Moreover, our findings suggest that the high mobility of telomeric nucleosomes may be relevant to the dynamics of telomeric chromatin.

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Year:  2007        PMID: 17498745     DOI: 10.1016/j.jmb.2007.04.027

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  28 in total

1.  Computational study of remodeling in a nucleosomal array.

Authors:  Raoul D Schram; Henrike Klinker; Peter B Becker; Helmut Schiessel
Journal:  Eur Phys J E Soft Matter       Date:  2015-08-10       Impact factor: 1.890

2.  No overt nucleosome eviction at deprotected telomeres.

Authors:  Peng Wu; Titia de Lange
Journal:  Mol Cell Biol       Date:  2008-07-14       Impact factor: 4.272

Review 3.  Fusing telomeres with RNF8.

Authors:  Jacqueline J L Jacobs
Journal:  Nucleus       Date:  2012-03-01       Impact factor: 4.197

4.  DNA-damage response and repair activities at uncapped telomeres depend on RNF8.

Authors:  Marieke H Peuscher; Jacqueline J L Jacobs
Journal:  Nat Cell Biol       Date:  2011-08-21       Impact factor: 28.824

5.  Atomic Force Microscopy Reveals that the Drosophila Telomere-Capping Protein Verrocchio Is a Single-Stranded DNA-Binding Protein.

Authors:  Alessandro Cicconi; Emanuela Micheli; Grazia Daniela Raffa; Stefano Cacchione
Journal:  Methods Mol Biol       Date:  2021

6.  Rigid-body molecular dynamics of DNA inside a nucleosome.

Authors:  Arman Fathizadeh; Azim Berdy Besya; Mohammad Reza Ejtehadi; Helmut Schiessel
Journal:  Eur Phys J E Soft Matter       Date:  2013-03-13       Impact factor: 1.890

7.  In silico evidence for sequence-dependent nucleosome sliding.

Authors:  Joshua Lequieu; David C Schwartz; Juan J de Pablo
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-18       Impact factor: 11.205

8.  The Drosophila telomere-capping protein Verrocchio binds single-stranded DNA and protects telomeres from DNA damage response.

Authors:  Alessandro Cicconi; Emanuela Micheli; Fiammetta Vernì; Alison Jackson; Ana Citlali Gradilla; Francesca Cipressa; Domenico Raimondo; Giuseppe Bosso; James G Wakefield; Laura Ciapponi; Giovanni Cenci; Maurizio Gatti; Stefano Cacchione; Grazia Daniela Raffa
Journal:  Nucleic Acids Res       Date:  2017-04-07       Impact factor: 16.971

9.  Chromatin remodelers act globally, sequence positions nucleosomes locally.

Authors:  Peretz D Partensky; Geeta J Narlikar
Journal:  J Mol Biol       Date:  2009-05-18       Impact factor: 5.469

10.  The human telomeric protein hTRF1 induces telomere-specific nucleosome mobility.

Authors:  Sabrina Pisano; Daniela Leoni; Alessandra Galati; Daniela Rhodes; Maria Savino; Stefano Cacchione
Journal:  Nucleic Acids Res       Date:  2010-01-07       Impact factor: 16.971

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