Literature DB >> 17485375

Repair and recombination induced by triple helix DNA.

Joanna Y Chin1, Erica B Schleifman, Peter M Glazer.   

Abstract

Triple-helix DNA structures can form endogenously at mirror repeat polypurine/polypyrimidine sequences or by introduction of triplex-forming oligonucleotides (TFOs). Recent evidence suggests that triple helices are sources of genetic instability, and are subject to increased rates of mutagenesis and recruitment of repair factors. Indeed, observations using TFOs suggest that triple helices provoke a variety of biological processes which can be harnessed to modulate gene expression and induce heritable changes in targeted genes. This review surveys the biological applications of TFOs, with particular attention to their recombinogenic and mutagenic potential, and summarizes available evidence for the mechanism of triplex and triplex-associated repair.

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Year:  2007        PMID: 17485375     DOI: 10.2741/2388

Source DB:  PubMed          Journal:  Front Biosci        ISSN: 1093-4715


  19 in total

1.  Next generation tools for the annotation of human SNPs.

Authors:  Rachel Karchin
Journal:  Brief Bioinform       Date:  2009-01       Impact factor: 11.622

Review 2.  Potential in vivo roles of nucleic acid triple-helices.

Authors:  Fabian A Buske; John S Mattick; Timothy L Bailey
Journal:  RNA Biol       Date:  2011-05-01       Impact factor: 4.652

3.  The dynamics of forming a triplex in an artificial telomere inferred by DNA mechanics.

Authors:  Ning Li; Junli Wang; Kangkang Ma; Lin Liang; Lipei Mi; Wei Huang; Xiaofeng Ma; Zeyu Wang; Wei Zheng; Linyan Xu; Jun-Hu Chen; Zhongbo Yu
Journal:  Nucleic Acids Res       Date:  2019-09-05       Impact factor: 16.971

Review 4.  Oligo/polynucleotide-based gene modification: strategies and therapeutic potential.

Authors:  R Geoffrey Sargent; Soya Kim; Dieter C Gruenert
Journal:  Oligonucleotides       Date:  2011-03-21

Review 5.  Repair of DNA lesions associated with triplex-forming oligonucleotides.

Authors:  Joanna Y Chin; Peter M Glazer
Journal:  Mol Carcinog       Date:  2009-04       Impact factor: 4.784

6.  Systemic delivery of triplex-forming PNA and donor DNA by nanoparticles mediates site-specific genome editing of human hematopoietic cells in vivo.

Authors:  N A McNeer; E B Schleifman; A Cuthbert; M Brehm; A Jackson; C Cheng; K Anandalingam; P Kumar; L D Shultz; D L Greiner; W Mark Saltzman; P M Glazer
Journal:  Gene Ther       Date:  2012-10-18       Impact factor: 5.250

7.  Targeted genome modification via triple helix formation.

Authors:  Adele S Ricciardi; Nicole A McNeer; Kavitha K Anandalingam; W Mark Saltzman; Peter M Glazer
Journal:  Methods Mol Biol       Date:  2014

8.  Human replication protein A melts a DNA triple helix structure in a potent and specific manner.

Authors:  Yuliang Wu; Nina Rawtani; Arun Kalliat Thazhathveetil; Mark K Kenny; Michael M Seidman; Robert M Brosh
Journal:  Biochemistry       Date:  2008-04-15       Impact factor: 3.162

9.  TTS mapping: integrative WEB tool for analysis of triplex formation target DNA sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome.

Authors:  Piroon Jenjaroenpun; Vladimir A Kuznetsov
Journal:  BMC Genomics       Date:  2009-12-03       Impact factor: 3.969

10.  High-affinity triplex targeting of double stranded DNA using chemically modified peptide nucleic acid oligomers.

Authors:  Mads E Hansen; Thomas Bentin; Peter E Nielsen
Journal:  Nucleic Acids Res       Date:  2009-05-27       Impact factor: 16.971

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