Literature DB >> 17473351

Resolution improvement in emission optical projection tomography.

Johnathon R Walls1, John G Sled, James Sharpe, R Mark Henkelman.   

Abstract

A new imaging technique called emission optical projection tomography (eOPT), essentially an optical version of single-photon emission computed tomography (SPECT), provides molecular specificity, resolution on the order of microns to tens of microns, and large specimen coverage ( approximately 1 cubic centimetre). It is ideally suited to gene expression studies in embryos. Reconstructed eOPT images suffer from blurring that worsens as the distance from the axis of rotation increases. This blur is caused in part by the defocusing of the lens' point-spread function, which increases with object distance from the focal plane. In this paper, we describe a frequency space filter based on the frequency-distance relationship of sinograms to deconvolve the distance-dependent point-spread function and exclude highly defocused data from the eOPT sinograms prior to reconstruction. The method is shown to reduce the volume at half-maximum of the reconstructed point-spread function to approximately 20% the original, and the volume at 10% maximum to approximately 6% the original. As an illustration, the visibility of fine details in the vasculature of a 9.5 day old mouse embryo is dramatically improved.

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Year:  2007        PMID: 17473351     DOI: 10.1088/0031-9155/52/10/010

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  21 in total

Review 1.  Going deeper than microscopy: the optical imaging frontier in biology.

Authors:  Vasilis Ntziachristos
Journal:  Nat Methods       Date:  2010-07-30       Impact factor: 28.547

Review 2.  Imaging the zebrafish dentition: from traditional approaches to emerging technologies.

Authors:  Bart Bruneel; Markus Mathä; Rik Paesen; Marcel Ameloot; Wolfgang J Weninger; Ann Huysseune
Journal:  Zebrafish       Date:  2015-01-05       Impact factor: 1.985

3.  Cellular resolution multiplexed FLIM tomography with dual-color Bessel beam.

Authors:  Dongli Xu; Weibin Zhou; Leilei Peng
Journal:  Biomed Opt Express       Date:  2017-01-04       Impact factor: 3.732

4.  Going "open" with mesoscopy: a new dimension on multi-view imaging.

Authors:  Emilio Gualda; Nuno Moreno; Pavel Tomancak; Gabriel G Martins
Journal:  Protoplasma       Date:  2014-01-18       Impact factor: 3.356

5.  Direct inversion algorithm for focal plane scanning optical projection tomography.

Authors:  Kevin G Chan; Michael Liebling
Journal:  Biomed Opt Express       Date:  2017-10-31       Impact factor: 3.732

6.  Optical projection tomography for rapid whole mouse brain imaging.

Authors:  David Nguyen; Paul J Marchand; Arielle L Planchette; Julia Nilsson; Miguel Sison; Jérôme Extermann; Antonio Lopez; Marcin Sylwestrzak; Jessica Sordet-Dessimoz; Anja Schmidt-Christensen; Dan Holmberg; Dimitri Van De Ville; Theo Lasser
Journal:  Biomed Opt Express       Date:  2017-11-15       Impact factor: 3.732

7.  Neuroanatomical phenotyping of the mouse brain with three-dimensional autofluorescence imaging.

Authors:  Jacqueline A Gleave; Michael D Wong; Jun Dazai; Maliha Altaf; R Mark Henkelman; Jason P Lerch; Brian J Nieman
Journal:  Physiol Genomics       Date:  2012-06-19       Impact factor: 3.107

8.  Quantitative 3-dimensional imaging of murine neointimal and atherosclerotic lesions by optical projection tomography.

Authors:  Nicholas S Kirkby; Lucinda Low; Jonathan R Seckl; Brian R Walker; David J Webb; Patrick W F Hadoke
Journal:  PLoS One       Date:  2011-02-17       Impact factor: 3.240

9.  In vivo fluorescence lifetime optical projection tomography.

Authors:  James McGinty; Harriet B Taylor; Lingling Chen; Laurence Bugeon; Jonathan R Lamb; Margaret J Dallman; Paul M W French
Journal:  Biomed Opt Express       Date:  2011-04-26       Impact factor: 3.732

10.  Correction for specimen movement and rotation errors for in-vivo Optical Projection Tomography.

Authors:  Udo Jochen Birk; Matthias Rieckher; Nikos Konstantinides; Alex Darrell; Ana Sarasa-Renedo; Heiko Meyer; Nektarios Tavernarakis; Jorge Ripoll
Journal:  Biomed Opt Express       Date:  2010-07-14       Impact factor: 3.732

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