Literature DB >> 17466501

The 4C technique: the 'Rosetta stone' for genome biology in 3D?

Rolf Ohlsson1, Anita Göndör.   

Abstract

Despite considerable efforts, the spatial link between the nuclear architecture and the genome remains enigmatic. The 4C method, independently innovated in four different laboratories, might in combination with other methods change that. As this method is based on the unbiased identification of sequences interacting with specific baits, there are unique opportunities for unravelling the secrets of how the genome functions in 3D.

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Year:  2007        PMID: 17466501     DOI: 10.1016/j.ceb.2007.04.008

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  13 in total

1.  The fractal globule as a model of chromatin architecture in the cell.

Authors:  Leonid A Mirny
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

2.  Sensitive detection of chromatin coassociations using enhanced chromosome conformation capture on chip.

Authors:  Tom Sexton; Sreenivasulu Kurukuti; Jennifer A Mitchell; David Umlauf; Takashi Nagano; Peter Fraser
Journal:  Nat Protoc       Date:  2012-06-21       Impact factor: 13.491

3.  Genomic approaches for the discovery of CFTR regulatory elements.

Authors:  Christopher J Ott; Ann Harris
Journal:  Transcription       Date:  2011 Jan-Feb

4.  Mechanism of Regulation of Intrachromatid Recombination and Long-Range Chromosome Interactions in Saccharomyces cerevisiae.

Authors:  Shamsu Zaman; Malay Choudhury; James C Jiang; Pankaj Srivastava; Bidyut K Mohanty; Christopher Danielson; Sean J Humphrey; S Michal Jazwinski; Deepak Bastia
Journal:  Mol Cell Biol       Date:  2016-05-02       Impact factor: 4.272

5.  Investigations of pi initiator protein-mediated interaction between replication origins alpha and gamma of the plasmid R6K.

Authors:  Mukesh Saxena; Samarendra Singh; Shamsu Zzaman; Deepak Bastia
Journal:  J Biol Chem       Date:  2009-12-22       Impact factor: 5.157

6.  The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules.

Authors:  Davide Baù; Amartya Sanyal; Bryan R Lajoie; Emidio Capriotti; Meg Byron; Jeanne B Lawrence; Job Dekker; Marc A Marti-Renom
Journal:  Nat Struct Mol Biol       Date:  2010-12-05       Impact factor: 15.369

Review 7.  3D shortcuts to gene regulation.

Authors:  Ofir Hakim; Myong-Hee Sung; Gordon L Hager
Journal:  Curr Opin Cell Biol       Date:  2010-05-11       Impact factor: 8.382

8.  15q11.2-13.3 chromatin analysis reveals epigenetic regulation of CHRNA7 with deficiencies in Rett and autism brain.

Authors:  Dag H Yasui; Haley A Scoles; Shin-Ichi Horike; Makiko Meguro-Horike; Keith W Dunaway; Diane I Schroeder; Janine M Lasalle
Journal:  Hum Mol Genet       Date:  2011-08-12       Impact factor: 6.150

Review 9.  Deconstructing repression: evolving models of co-repressor action.

Authors:  Valentina Perissi; Kristen Jepsen; Christopher K Glass; Michael G Rosenfeld
Journal:  Nat Rev Genet       Date:  2010-02       Impact factor: 53.242

10.  Advances in the identification and analysis of allele-specific expression.

Authors:  Christopher G Bell; Stephan Beck
Journal:  Genome Med       Date:  2009-05-29       Impact factor: 11.117

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