Literature DB >> 17466340

A modelling approach towards epidermal homoeostasis control.

Gernot Schaller1, Michael Meyer-Hermann.   

Abstract

In order to grasp the features arising from cellular discreteness and individuality, in large parts of cell tissue modelling agent-based models are favoured. The subclass of off-lattice models allows for a physical motivation of the intercellular interaction rules. We apply an improved version of a previously introduced off-lattice agent-based model to the steady-state flow equilibrium of skin. The dynamics of cells is determined by conservative and drag forces, supplemented with delta-correlated random forces. Cellular adjacency is detected by a weighted Delaunay triangulation. The cell cycle time of keratinocytes is controlled by a diffusible substance provided by the dermis. Its concentration is calculated from a diffusion equation with time-dependent boundary conditions and varying diffusion coefficients. The dynamics of a nutrient is also taken into account by a reaction-diffusion equation. It turns out that the analysed control mechanism suffices to explain several characteristics of epidermal homoeostasis formation. In addition, we examine the question of how in silico melanoma with decreased basal adhesion manage to persist within the steady-state flow equilibrium of the skin. Interestingly, even for melanocyte cell cycle times being substantially shorter than for keratinocytes, tiny stochastic effects can lead to completely different outcomes. The results demonstrate that the understanding of initial states of tumour growth can profit significantly from the application of off-lattice agent-based models in computer simulations.

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Year:  2007        PMID: 17466340     DOI: 10.1016/j.jtbi.2007.03.023

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  16 in total

1.  Modelling epidermis homoeostasis and psoriasis pathogenesis.

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2.  Cancer therapeutic potential of combinatorial immuno- and vasomodulatory interventions.

Authors:  H Hatzikirou; J C L Alfonso; S Mühle; C Stern; S Weiss; M Meyer-Hermann
Journal:  J R Soc Interface       Date:  2015-11-06       Impact factor: 4.118

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4.  Computational modeling of epithelial-mesenchymal transformations.

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Journal:  Biosystems       Date:  2009-12-31       Impact factor: 1.973

5.  From single cells to tissue architecture-a bottom-up approach to modelling the spatio-temporal organisation of complex multi-cellular systems.

Authors:  J Galle; M Hoffmann; G Aust
Journal:  J Math Biol       Date:  2008-04-02       Impact factor: 2.259

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Journal:  BMC Syst Biol       Date:  2010-08-09

7.  Senescent fibroblasts in melanoma initiation and progression: an integrated theoretical, experimental, and clinical approach.

Authors:  Eunjung Kim; Vito Rebecca; Inna V Fedorenko; Jane L Messina; Rahel Mathew; Silvya S Maria-Engler; David Basanta; Keiran S M Smalley; Alexander R A Anderson
Journal:  Cancer Res       Date:  2013-09-30       Impact factor: 12.701

8.  Spatial organization of mesenchymal stem cells in vitro--results from a new individual cell-based model with podia.

Authors:  Martin Hoffmann; Jens-Peer Kuska; Matthias Zscharnack; Markus Loeffler; Joerg Galle
Journal:  PLoS One       Date:  2011-07-08       Impact factor: 3.240

9.  Skin stem cell hypotheses and long term clone survival--explored using agent-based modelling.

Authors:  X Li; A K Upadhyay; A J Bullock; T Dicolandrea; J Xu; R L Binder; M K Robinson; D R Finlay; K J Mills; C C Bascom; C K Kelling; R J Isfort; J W Haycock; S MacNeil; R H Smallwood
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

10.  A computational model of the epidermis with the deformable dermis and its application to skin diseases.

Authors:  Kota Ohno; Yasuaki Kobayashi; Masaaki Uesaka; Takeshi Gotoda; Mitsuhiro Denda; Hideyuki Kosumi; Mika Watanabe; Ken Natsuga; Masaharu Nagayama
Journal:  Sci Rep       Date:  2021-06-24       Impact factor: 4.379

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