Literature DB >> 17452450

Depletion of mammalian CCR4b deadenylase triggers elevation of the p27Kip1 mRNA level and impairs cell growth.

Masahiro Morita1, Toru Suzuki, Takahisa Nakamura, Kazumasa Yokoyama, Takashi Miyasaka, Tadashi Yamamoto.   

Abstract

The stability of mRNA influences the abundance of cellular transcripts and proteins. Deadenylases play critical roles in mRNA turnover and thus are important for the regulation of various biological events. Here, we report the identification and characterization of CCR4b/CNOT6L, which is homologous to yeast CCR4 mRNA deadenylase. CCR4b is localized mainly in the cytoplasm and displays deadenylase activity both in vitro and in vivo. CCR4b forms a multisubunit complex similar to the yeast CCR4-NOT complex. Suppression of CCR4b by RNA interference results in growth retardation of NIH 3T3 cells accompanied by elevation of both p27(Kip1) mRNA and p27(Kip1) protein. Reintroduction of wild-type CCR4b, but not mutant CCR4b lacking deadenylase activity, restores the growth of CCR4b-depleted NIH 3T3 cells. The data suggest that CCR4b regulates cell growth in a manner dependent on its deadenylase activity. We also show that p27(Kip1) mRNA is stabilized and its poly(A) tail is preserved in CCR4b-depleted cells. Our findings provide evidence that CCR4b deadenylase is a constituent of the mammalian CCR4-NOT complex and regulates the turnover rate of specific target mRNAs. Thus, CCR4b may be involved in various cellular events that include cell proliferation.

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Year:  2007        PMID: 17452450      PMCID: PMC1951489          DOI: 10.1128/MCB.02304-06

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  36 in total

Review 1.  The cap-to-tail guide to mRNA turnover.

Authors:  C J Wilusz; M Wormington; S W Peltz
Journal:  Nat Rev Mol Cell Biol       Date:  2001-04       Impact factor: 94.444

2.  CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase.

Authors:  Junji Chen; Yueh-Chin Chiang; Clyde L Denis
Journal:  EMBO J       Date:  2002-03-15       Impact factor: 11.598

3.  A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements.

Authors:  M Gao; C J Wilusz; S W Peltz; J Wilusz
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

4.  The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae.

Authors:  M Tucker; M A Valencia-Sanchez; R R Staples; J Chen; C L Denis; R Parker
Journal:  Cell       Date:  2001-02-09       Impact factor: 41.582

5.  Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex.

Authors:  J Chen; J Rappsilber; Y C Chiang; P Russell; M Mann; C L Denis
Journal:  J Mol Biol       Date:  2001-12-07       Impact factor: 5.469

6.  The ubiquitous transcription factor NF-Y positively regulates the transcription of human p27Kip1 through a CCAAT box located in the 5-upstream region of the p27Kip1 gene.

Authors:  J Kamiyama; T Inoue; N Ohtani-Fujita; S Minami; H Yamagishi; T Sakai
Journal:  FEBS Lett       Date:  1999-07-23       Impact factor: 4.124

7.  The telomeric poly(ADP-ribose) polymerase, tankyrase 1, contains multiple binding sites for telomeric repeat binding factor 1 (TRF1) and a novel acceptor, 182-kDa tankyrase-binding protein (TAB182).

Authors:  Hiroyuki Seimiya; Susan Smith
Journal:  J Biol Chem       Date:  2002-02-19       Impact factor: 5.157

8.  Oligo-astheno-teratozoospermia in mice lacking Cnot7, a regulator of retinoid X receptor beta.

Authors:  Takahisa Nakamura; Ryoji Yao; Takehiko Ogawa; Toru Suzuki; Chizuru Ito; Naoki Tsunekawa; Kimiko Inoue; Rieko Ajima; Takashi Miyasaka; Yutaka Yoshida; Atsuo Ogura; Kiyotaka Toshimori; Toshiaki Noce; Tadashi Yamamoto; Tetsuo Noda
Journal:  Nat Genet       Date:  2004-04-25       Impact factor: 38.330

9.  Negative regulation of BMP/Smad signaling by Tob in osteoblasts.

Authors:  Y Yoshida; S Tanaka; H Umemori; O Minowa; M Usui; N Ikematsu; E Hosoda; T Imamura; J Kuno; T Yamashita; K Miyazono; M Noda; T Noda; T Yamamoto
Journal:  Cell       Date:  2000-12-22       Impact factor: 41.582

10.  Phosphorylation of three regulatory serines of Tob by Erk1 and Erk2 is required for Ras-mediated cell proliferation and transformation.

Authors:  Toru Suzuki; Junko K-Tsuzuku; Rieko Ajima; Takahisa Nakamura; Yutaka Yoshida; Tadashi Yamamoto
Journal:  Genes Dev       Date:  2002-06-01       Impact factor: 11.361

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  50 in total

1.  miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT.

Authors:  Marc R Fabian; Maja K Cieplak; Filipp Frank; Masahiro Morita; Jonathan Green; Tharan Srikumar; Bhushan Nagar; Tadashi Yamamoto; Brian Raught; Thomas F Duchaine; Nahum Sonenberg
Journal:  Nat Struct Mol Biol       Date:  2011-10-07       Impact factor: 15.369

2.  The role of the CNOT1 subunit of the CCR4-NOT complex in mRNA deadenylation and cell viability.

Authors:  Kentaro Ito; Akinori Takahashi; Masahiro Morita; Toru Suzuki; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2011-10-06       Impact factor: 14.870

3.  Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.

Authors:  Hui Wang; Masahiro Morita; Xiuna Yang; Toru Suzuki; Wen Yang; Jiao Wang; Kentaro Ito; Quan Wang; Cong Zhao; Mark Bartlam; Tadashi Yamamoto; Zihe Rao
Journal:  EMBO J       Date:  2010-07-13       Impact factor: 11.598

Review 4.  The structural basis for deadenylation by the CCR4-NOT complex.

Authors:  Mark Bartlam; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2010-06-04       Impact factor: 14.870

5.  Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation.

Authors:  Claudia Temme; Lianbing Zhang; Elisabeth Kremmer; Christian Ihling; Aymeric Chartier; Andrea Sinz; Martine Simonelig; Elmar Wahle
Journal:  RNA       Date:  2010-05-26       Impact factor: 4.942

6.  CNOT3 targets negative cell cycle regulators in non-small cell lung cancer development.

Authors:  Yo-Taro Shirai; Anna Mizutani; Saori Nishijima; Masafumi Horie; Chisato Kikuguchi; Olga Elisseeva; Tadashi Yamamoto
Journal:  Oncogene       Date:  2018-12-10       Impact factor: 9.867

7.  NANOS2 interacts with the CCR4-NOT deadenylation complex and leads to suppression of specific RNAs.

Authors:  Atsushi Suzuki; Katsuhide Igarashi; Ken-Ichi Aisaki; Jun Kanno; Yumiko Saga
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-02       Impact factor: 11.205

8.  Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.

Authors:  Ying Chen; Elena Khazina; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

9.  Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa.

Authors:  Wei-Lun Chou; Li-Fen Huang; Jhen-Cheng Fang; Ching-Hui Yeh; Chwan-Yang Hong; Shaw-Jye Wu; Chung-An Lu
Journal:  Plant Mol Biol       Date:  2014-05-08       Impact factor: 4.076

10.  The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation.

Authors:  Akhmed Aslam; Saloni Mittal; Frederic Koch; Jean-Christophe Andrau; G Sebastiaan Winkler
Journal:  Mol Biol Cell       Date:  2009-07-15       Impact factor: 4.138

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