Literature DB >> 17449827

The biological importance of measuring individual variation.

Douglas L Crawford1, Marjorie F Oleksiak.   

Abstract

Functional genomics research using Fundulus heteroclitus has focused on variation among individuals because of the evolutionary importance and value of Fundulus in explaining the human condition (why individual humans are different and are affected differently by stress, disease and drugs). Among different populations and species of Fundulus, there are evolutionarily adaptive differences in gene expression. This natural variation in gene expression seems to affect cardiac metabolism because up to 81% of the variation in glucose utilization observed in isolated heart ventricles is related to specific patterns of gene expression. The surprising result from this research is that among different groups of individuals, the expression of mRNA from different metabolic pathways explains substrate-specific metabolism. For example, variation in oxidative phosphorylation mRNAs explains glucose metabolism for one group of individuals but expression of glucose metabolism genes explains this metabolism in a different group of individuals. This variation among individuals has important implications for studies using inbred strains: conclusions based on one individual or one strain will not necessarily reflect a generalized conclusion for a population or species. Finally, there are surprisingly strong positive and negative correlations among metabolic genes, both within and between pathways. These data suggest that measures of mRNA expression are meaningful, yet there is a complexity in how gene expression is related to physiological processes.

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Year:  2007        PMID: 17449827     DOI: 10.1242/jeb.005454

Source DB:  PubMed          Journal:  J Exp Biol        ISSN: 0022-0949            Impact factor:   3.312


  20 in total

1.  Acclimation and acute temperature effects on population differences in oxidative phosphorylation.

Authors:  Tara Z Baris; Douglas L Crawford; Marjorie F Oleksiak
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2015-11-18       Impact factor: 3.619

Review 2.  Genomic approaches with natural fish populations.

Authors:  M F Oleksiak
Journal:  J Fish Biol       Date:  2010-04       Impact factor: 2.051

3.  The effect of short-term hypoxic exposure on metabolic gene expression.

Authors:  Meredith V Everett; Corina E Antal; Douglas L Crawford
Journal:  J Exp Zool A Ecol Genet Physiol       Date:  2011-10-21

4.  Developmental and genetic origins of murine long bone length variation.

Authors:  Thomas J Sanger; Elizabeth A Norgard; L Susan Pletscher; Michael Bevilacqua; Victoria R Brooks; Linda J Sandell; James M Cheverud
Journal:  J Exp Zool B Mol Dev Evol       Date:  2010-12-01       Impact factor: 2.656

5.  Estimating the potential for adaptation of corals to climate warming.

Authors:  Nikolaus B M Császár; Peter J Ralph; Richard Frankham; Ray Berkelmans; Madeleine J H van Oppen
Journal:  PLoS One       Date:  2010-03-18       Impact factor: 3.240

6.  The effect of genetic and environmental variation on metabolic gene expression.

Authors:  Cinda P Scott; Dean A Williams; Douglas L Crawford
Journal:  Mol Ecol       Date:  2009-05-29       Impact factor: 6.185

7.  Natural variation of the cardiac transcriptome in humans.

Authors:  Tatiana Domitrovic; Mariana H Moreira; Rodolfo L Carneiro; Marcelo Ribeiro-Alves; Fernando L Palhano
Journal:  RNA Biol       Date:  2020-12-11       Impact factor: 4.652

8.  Technical analysis of cDNA microarrays.

Authors:  Cinda P Scott; Jeff VanWye; M Danielle McDonald; Douglas L Crawford
Journal:  PLoS One       Date:  2009-02-16       Impact factor: 3.240

9.  Interindividual plasticity in metabolic and thermal tolerance traits from populations subjected to recent anthropogenic heating.

Authors:  Melissa K Drown; Amanda N DeLiberto; Moritz A Ehrlich; Douglas L Crawford; Marjorie F Oleksiak
Journal:  R Soc Open Sci       Date:  2021-07-21       Impact factor: 2.963

Review 10.  Transcriptomic changes in peripheral blood mononuclear cells with weight loss: systematic literature review and primary data synthesis.

Authors:  Kaitlin Day; Aimee L Dordevic; Helen Truby; Melissa C Southey; Susan Coort; Chiara Murgia
Journal:  Genes Nutr       Date:  2021-07-19       Impact factor: 5.523

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